Gene SO_2276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2276 
Symbol 
ID1170005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2388041 
End bp2388598 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content48% 
IMG OID637344122 
ProductISSod10, transposase OrfB 
Protein accessionNP_717872 
Protein GI24373829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTTA ACACCCCAGG ACACGTTGCA CTCGATCGCA TTGATGTTTG GTTTCAAGAT 
GAAGCCAGAT TTGGTCAACA AAACACCACC ACTCGTATCT GGGCTGAGAA AGGGACTCGG 
CCACGAGCAG TAAAACAGCA ACAGTTTGAA TCAGCGTATT TATTTGGGGC TCTGTGTCCG 
GCAACAGGCG CCACGGAAGC CATTCTCGCC CCGTTTGCCA ACAGCGATTA TATGCATGAA 
CACTTAAAAT TGATCTCGGC CGCAACAGAA TTTGGACGAC ATGCACTGGT CATCATGGAC 
GGTGCGGGCT GGCATCAACG AGATTTAGCC GATGACTTTG ATAACCTAAG TATCGTCAAA 
CTCCCCCCAT ATTCACCGGA GTTGAATCCG ATGGAGCAGG TCTGGCAATG GCTGCGTCAA 
CATGTGCTGG CAAATCGCAG CTTTAAGGGC TACGACGATA TTGTCGAGCA ATGCTCCATC 
GCATGGAATA CATTTATAAA AGAACCGCTG AGGGTAATGC AATTATGCTC TAGGCAGTGG 
GCAAAGATGA ACAGTTAA
 
Protein sequence
MILNTPGHVA LDRIDVWFQD EARFGQQNTT TRIWAEKGTR PRAVKQQQFE SAYLFGALCP 
ATGATEAILA PFANSDYMHE HLKLISAATE FGRHALVIMD GAGWHQRDLA DDFDNLSIVK 
LPPYSPELNP MEQVWQWLRQ HVLANRSFKG YDDIVEQCSI AWNTFIKEPL RVMQLCSRQW 
AKMNS