Gene SO_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2275 
Symbol 
ID1170004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2387572 
End bp2388051 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content47% 
IMG OID637344121 
ProductISSod10, transposase OrfA 
Protein accessionNP_717871 
Protein GI24373828 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATC CAGACATTGC TGCATTAGTT AAATCCGAGA AAAGCGCACG TAAACGGATC 
CGCTATCTCG CTCTGCTTCA CTTCACAGAA GGTCATTCCC GTACTGCTAT CGCCAGTATG 
TTGAAGGTCA GCAGAACCAG TGTGAATAAG TGGGTCTCCA CTTATCTTTC CTTGGGACTG 
TCCGGCCTAA ATGACAAGCC AAATCCGGGA CGTCCCGCTA AATTGTCCTC CTCGCAACTA 
GCAACCCTAG CAGAATTCGT CCAGCTCAAA AGTCTATCTG AGCAAGGTGG CAGACTAATG 
GCCAAGGATG TCGGCGACTT TATCCAGTCT GAATTTGGCG TGACTTTCAA GCAAACTAAT 
CTCTACCGTT TACTACATCA ATTAGGCTTT TCGTGGATCA CTACGAGAGC ACGTCATCCG 
AAGCAATCTG AAGCTGTGCA AGAGTCTTTT AAAAAACTTC CCAATGGCAA TGATCCTTAA
 
Protein sequence
MSHPDIAALV KSEKSARKRI RYLALLHFTE GHSRTAIASM LKVSRTSVNK WVSTYLSLGL 
SGLNDKPNPG RPAKLSSSQL ATLAEFVQLK SLSEQGGRLM AKDVGDFIQS EFGVTFKQTN 
LYRLLHQLGF SWITTRARHP KQSEAVQESF KKLPNGNDP