| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2264 |
|---|
| Symbol | iscS |
|---|
| ID | 1169994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 2378951 |
|---|
| End bp | 2380165 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637344111 |
|---|
| Product | cysteine desulfurase |
|---|
| Protein accession | NP_717860 |
|---|
| Protein GI | 24373817 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTC CTATCTATTT AGATTATGCC GCCACCACGC CAGTCGATCC GCGAGTCGCG
GAAAAAATGT TCCAATACAT GACGATGGAT GGCATCTTTG GTAACCCAGC ATCACGTTCT
CACCGTTATG GCTGGCAAGC TGAAGAAGCG GTAGATGTTG CTCGCAATCA AGTGGCAGAT
CTTATCAATG CTGATCACCG TGAAATCGTG TTTACCTCAG GTGCAACTGA GTCGAACAAC
CTCGCTATCA AAGGCGTAGC ACATTTCTAT AAAAAGAAAG GCAAGCACAT AATCACCAGC
AAGACTGAAC ATAAAGCTGT GCTCGATACT TGTCGTCAGC TTGAACGTGA AGGTTTTGAA
GTCACCTATT TAGAACCAGA ATCTAACGGC ATTATCCCGA TGGCGCGTTT AGAAGCGGCG
ATGCGTGACG ATACTATTCT CGTCAGTATC ATGCATGTGA ATAACGAAAT TGGTGTGATC
CACGATATCG ATGCCATTGG TGAATTATGC CGCTCTAAAG GCATTATTTT TCATATGGAT
GCGGCGCAAA GCGCTGGTAA ATTACCGATT GATGTTCAAG CCACTAAGGT TGATCTGATC
TCCATTTCTG GCCACAAAAT GTATGGCCCC AAAGGGATTG GTGCACTGTA TGTTCGCCGT
AAACCTCGCA TTCGTTTAGA AGCGCAAATG CATGGCGGTG GGCATGAACG CGGTATGCGT
AGCGGTACTC TGCCAACTCA CCAAATCGTC GGTTTAGGTG AGGCATCTGC GATTGCTAAA
GCTGAAATGG CAACAGATAA CGTACGTATT GCAAAACTGC GTGACAAGTT ATGGAATGGC
ATCAAGCACA TTGAAGAAAC CTATGTGAAC GGTGATATGA ATCAGCGCAC GAGCGGTAGT
CTTAACGTCA GCTTCAACTA TGTTGAAGGT GAGTCGCTGA TGATGGCATT AAAAGATTTA
GCCGTTTCAT CGGGTTCGGC TTGTACATCA GCCAGTTTAG AGCCTAGCTA TGTGTTACGT
GCACTTGGCC TAAATGATGA AATGGCCCAT AGCTCAATTC GTTTCTCTAT CGGCCGTTTT
ACGACCGAAG AAGAAATCGA CCACGCTATC GAAGTTATTA CTCAATCTAT TGATAAATTA
AGAGAAATGT CCCCATTGTG GGAGATGTTC AAAGATGGCA TTGACCTGAA TCAGGTGCAG
TGGGCTCATC ATTAA
|
|---|
| Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMFQYMTMD GIFGNPASRS HRYGWQAEEA VDVARNQVAD
LINADHREIV FTSGATESNN LAIKGVAHFY KKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLEPESNG IIPMARLEAA MRDDTILVSI MHVNNEIGVI HDIDAIGELC RSKGIIFHMD
AAQSAGKLPI DVQATKVDLI SISGHKMYGP KGIGALYVRR KPRIRLEAQM HGGGHERGMR
SGTLPTHQIV GLGEASAIAK AEMATDNVRI AKLRDKLWNG IKHIEETYVN GDMNQRTSGS
LNVSFNYVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF
TTEEEIDHAI EVITQSIDKL REMSPLWEMF KDGIDLNQVQ WAHH
|
|---|
| |