| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2259 |
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| Symbol | |
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| ID | 1169989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2374163 |
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| End bp | 2375413 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637344106 |
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| Product | lipoprotein releasing system transmembrane protein LolC, putative |
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| Protein accession | NP_717855 |
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| Protein GI | 24373812 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAC CATTAGCCCT CTCTATTGGT TGGCGTTTTT ACCGTGCGCG CCAATCCAAT
AGTTTTATTA GCTTTATTTC CTTTGCATCG ACAGCGGGTA TCGCCCTAGG CGTAGCCGTA
TTAATTATCG TGCTCTCGGC GATGAATGGT TTTGAGCGCG AGCTAGAGCA ACGTTTACTC
GGGGTGATCT CCCAAGCGGA TGTGGTGGGC GTGAATGAGC CGATTGCTGA CTGGCGCGCT
GTTGAGCAAA CCGCGCTGCA GATTGAAGGC ATTACTGCTG CGGCGCCTTT TATTCGTATG
CAGGGTTTAG TGCAAAAGCC CGGTGGTTTT CAGGGGCTTG CTGTCGTTGG CATTGATCCT
GAGCAAGAGG CAAAAGTCTC GACATTATCG CAATTTATGA GTCCAGAGAC GTGGCAAAGC
TTGAGTGAAG ATGATAATCA CATCGTCCTG GGTGAGAGTT TGCTGAAAAA ACTCGGCCTC
GAGGTTGGCG ATACGTTGGC ACTGTATGTA CAAGATCTTG ACCCTGAACA TGCGGGAAGT
TTACGTGCGG CAAAAAGCCA TCGCTTTGTG GTGTCAGGTG TTTATCGCTT AGGTGGTGAG
CTTGAATTAA CCACCGCGTA TATTCCAATG CGTTATGCGG CAAATATCCT GAATTTACAC
CAAGGCGTGA CGGGCGTTCG CATCAGTGTG ACGCAGGTGT TTGAGGCGCC AGCGAAAATT
CGCGAGTTAG GCTATGCGTT GAACCAGTCG GTGTATATTA GCGATTGGAC CCGTACACAA
GGGCACTTAT ATCAGGATAT TCAATTAGTT CGCACTATAA TGTACCTCGT ATTAGTACTG
GTGATCGGTG TGGCGTGTTT TAATATTGTC TCAACGCTCG TGATGGCGGT GCGCGATAAG
GCCAGTGAAA TTGCGATCCT GATGACCATG GGACTGAGCC GTTTATCGGT AATGGGCATT
TTTATGGTGC AGGGGGCATT AAACGGTTTA GTGGGGTGTG CGCTCGGTGG GGTGATTGGT
ATTGCGACAG CCATTAATCT CAGTGCTATT GCTCGTGACA TCGAGCAATT ACTTGGGATC
CAATTGTTAT CTGCGGATGT GTATTTTGTG GATTTTCTTC CCTCGGAACT GCATATGGCG
GATGTCAGTT TAGTCATTGC CACGGCGTTT GTGATGAGCC TGATTGCAAC GCTTTATCCC
GCATGGAAGG CGAGCCGAAT TGGCCCTGCG CAGGCATTGG CGGGCAGATA A
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| Protein sequence | MKGPLALSIG WRFYRARQSN SFISFISFAS TAGIALGVAV LIIVLSAMNG FERELEQRLL
GVISQADVVG VNEPIADWRA VEQTALQIEG ITAAAPFIRM QGLVQKPGGF QGLAVVGIDP
EQEAKVSTLS QFMSPETWQS LSEDDNHIVL GESLLKKLGL EVGDTLALYV QDLDPEHAGS
LRAAKSHRFV VSGVYRLGGE LELTTAYIPM RYAANILNLH QGVTGVRISV TQVFEAPAKI
RELGYALNQS VYISDWTRTQ GHLYQDIQLV RTIMYLVLVL VIGVACFNIV STLVMAVRDK
ASEIAILMTM GLSRLSVMGI FMVQGALNGL VGCALGGVIG IATAINLSAI ARDIEQLLGI
QLLSADVYFV DFLPSELHMA DVSLVIATAF VMSLIATLYP AWKASRIGPA QALAGR
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