| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2258 |
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| Symbol | lolD |
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| ID | 1169988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2373474 |
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| End bp | 2374166 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637344105 |
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| Product | lipoprotein releasing system ATP-binding protein LolD |
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| Protein accession | NP_717854 |
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| Protein GI | 24373811 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGATG TGTTACTGCA AGTGCAGGCG GTGAGTAAGA GTTATCACGA TGGCGATGTA
ACCACGCAAG TGTTATCCGA CGTCGATTTA CAGGTATTTA AGGGTGAGCA GCTGGCGATT
GTGGGCACTT CAGGCTCCGG TAAAAGTACG TTACTGCACA TTATGGGGAC GCTTGATAAA
CCTTCATCGG GCAAAGTGTT GTTGGCTGGT GAGGATTTAT ATCAGGTGAG CAGTGCGCGT
CAGGCGCAGA TCCGTAATCA GGATTTAGGC TTTATTTATC AATTTCATCA TTTATTGCCC
GAGTTCACCG CCCTTGAAAA CGTGGCTATG CCGGCATTTA TCCAAGGTCG TGATCGCACA
TTGGCGCAGG CCGATGCCAA GGTTTTGCTC GAGAGAGTAG GGCTTGGGCA CAGAATGAGC
CATATTCCTG CTGAGCTTTC AGGTGGTGAA CGGCAACGGG TGGCAATCGC TCGTGCGCTG
ATCAACAAAC CCAAGTTAGT GCTGGCCGAT GAGCCAACGG GAAACCTTGA TGCTAAGAGC
GGCGAGGCTG TGTATGAACT CATTCGCGAA TTGGCCAATC AACTTGGTAC GGCGTTTGTG
GTGGTCACCC ACGATCCTAA ATTAGCCGCG CGGATGGACA GACAACTCAC CATGAAAAAT
GGTTATCTGC AAGTACCGGA AAGCGCCCAA TGA
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| Protein sequence | MQDVLLQVQA VSKSYHDGDV TTQVLSDVDL QVFKGEQLAI VGTSGSGKST LLHIMGTLDK
PSSGKVLLAG EDLYQVSSAR QAQIRNQDLG FIYQFHHLLP EFTALENVAM PAFIQGRDRT
LAQADAKVLL ERVGLGHRMS HIPAELSGGE RQRVAIARAL INKPKLVLAD EPTGNLDAKS
GEAVYELIRE LANQLGTAFV VVTHDPKLAA RMDRQLTMKN GYLQVPESAQ
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