| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2257 |
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| Symbol | lolE |
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| ID | 1169987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2372143 |
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| End bp | 2373375 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637344104 |
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| Product | lipoprotein releasing system transmembrane protein LolE |
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| Protein accession | NP_717853 |
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| Protein GI | 24373810 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTTC GATTTCCTCT CTACGTTGGT TACCGTTATT GGCGGGCCAG AAAAGCAAAC
GCATTTGCTT CTTTTATTAC CTTATTTGCC GTTTCGGGCA TTTTTTTAGG GGTTGCCGCG
TTAATCGTGG TCAGTTCGGT GATGAATGGC CTTGAAGGGC AGTTAAAGCA GCGCATTCTT
GGCGCTGTGC CGCAATTGAC TGTTTACACT AAAGCTCCCT TAAGCGATTG GACAATTGCG
GCAGAAAAGC TAACCATGCT GCCCGGCGTG CAAGGGGTGA CACCTAGTGT GTCCACGCAA
GCCATGGTGC AGTCAGCGGC CAATATCCGT GCGGTACAAG TATTTGGCGT GTTTCCTGAG
CTTGCAGAAA AACTTTCTGC TGTGGCGCAA CATACCTATT CCGGCGCGTT TAGCGAGTTA
ACCAGTGGCC AGTATCAGGT CATCCTAGGC AGCGAACTGG CGCGTCAATT AAAGGTCAGC
CCTGGGGATA CGGTACGCTT ATTAAGTGGC GATGGCGTGG TGTACTCGCC GCTTGGCCCT
GTACCCAGCC AACGTAAATT TTTAGTGTCT GCCGTGTTTG AAATGGGCTC ACAGGTGGAT
GCGGGTGTCG CTTATGTTCA CTATCAAGAT GCAAAGCGGT TGATGCGCCA GCCTAGTGAT
GAAATCAACC AGCTAAGGCT TTATTTAAAC GATCCTTTTA CAGCGCCAGC GCTTGCCAAG
GATGTGCAAC AAATCTTGAC CGCGCAGGGC ATCGAGGCGA CCACGAGTGA TTGGCGTGAC
ACTTATGGTC ATCTGTTTAG CGCAGTGAAG ATGGAAAAAA ACATGATGTC GCTGATGCTC
AGCCTGATTG TGGCGGTAGC GGCATTCAAT ATTGTATCGG CACTGGTGAT GATGGTTGTC
GATAAAACCA CGGATGTAGC AGTGCTTAAA ACCCAAGGTT TAAGAACCTC CGCAGTCATG
GGCATTTTTG TAGTGCAAGG TTTACTCAAT GCAGTGTTAG GTTTAGCGCT GGGCTTAGTG
GTGGGCATTC TTATCACCCT TAATTTGAAT GGCCTTATGG CAACTCTTGG CATCTCGATT
TTAGGGGCAG GGCAAATGTT GCCGGTAAAA CTGGCGCTTG GGCAATTGTC GCTGATTATT
GTCGGCACCT TAGTTGTGAC CTTAGTGGCG ACCCTTTATC CTGCGCTACG GGCGGCAAGG
GTGCAGCCAG CGACTGCGCT GCGTTATGAA TAA
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| Protein sequence | MDLRFPLYVG YRYWRARKAN AFASFITLFA VSGIFLGVAA LIVVSSVMNG LEGQLKQRIL
GAVPQLTVYT KAPLSDWTIA AEKLTMLPGV QGVTPSVSTQ AMVQSAANIR AVQVFGVFPE
LAEKLSAVAQ HTYSGAFSEL TSGQYQVILG SELARQLKVS PGDTVRLLSG DGVVYSPLGP
VPSQRKFLVS AVFEMGSQVD AGVAYVHYQD AKRLMRQPSD EINQLRLYLN DPFTAPALAK
DVQQILTAQG IEATTSDWRD TYGHLFSAVK MEKNMMSLML SLIVAVAAFN IVSALVMMVV
DKTTDVAVLK TQGLRTSAVM GIFVVQGLLN AVLGLALGLV VGILITLNLN GLMATLGISI
LGAGQMLPVK LALGQLSLII VGTLVVTLVA TLYPALRAAR VQPATALRYE
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