| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2248 |
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| Symbol | sdaA |
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| ID | 1169979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2362473 |
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| End bp | 2363849 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637344096 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | NP_717844 |
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| Protein GI | 24373801 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGCG TATTCGATAT GTTCAAAATC GGTATTGGCC CTTCGAGTTC ACATACTGTT
GGCCCCATGA AAGCGGGCAA AATTTTTATG CAACACCTTG CTGATTCAGG GCAGATTGGC
CAAATTGATG AATTAAGGGC AGAACTGTTT GGTTCACTGG GCCAAACGGG TAAAGGCCAC
GGCACGGGTA AAGCAGTTAT TTTAGGATTA ATGGGTGAAG ATCCTGAAAC CGTCGATACA
GATAGCATCG ATGGCATTCT GGAACACGTC TCAAAATCGG AGACCCTGAC GATAAGCTGC
GGCAAAGTCG TTAAGTTTAC CCGTGAAGAC GGCATCACCT ACCACAGACG TAAAAGTCTC
CCTGCCCATG CCAATGCCAT GACGCTGTAT GCCTATAGCA AGGGCGAATG TATTTTTGAG
CGCACCTACT ACTCCGTTGG TGGTGGCTTT ATCTTAGATG AAGATGAAAT CAATCAGCGC
AATGCCTCGC CTGCATCGCA AATAGAATCG GCGCCCTACG ATTTTAATAG CAGCGCGCAG
TTACTCGAAC TCTGTACTGA ACATGGTCTG AGTATTTCTT CCTTAATGAT GGCGAACGAA
TTAAGCCTTG CCAGTGAAGA AGAAGTCAAA GCCAAGCTGT GGAATATTTG GCAAACCATG
AAGACCTGTA TCGAACGTGG TTACCAAAAA GAAGGCATTT TGCCAGGCGG CCTAAAACTG
CGTCGCCGAG CTCCGGCCCT GTATCGTCGT CTTAAAGCGG AAGGTCGCAA CAATGTTGAT
CCATTAACCG CAATGGATTG GGTCGACTTA TTCGCCTTAT CGGTTAATGA GCAAAATGCG
GCCGGCGATC GCGTCGTCAC CGCCCCGACT AACGGTGCGG CGGGCATTAT TCCTGCGGTG
CTTTGTTACT ACGATACCTT CGTACAAGAA GTCGATATCG ATGTATGCGC CCGTTACCTA
TTAACCGCCG CAGCGATTGG TATTCTGTAC AAGAAAAATG CCTCGATCTC CGGTGCAGAA
GTGGGCTGTC AAGGTGAAGT CGGCGTTGCC TGCTCTATGG CAGCAGGTGC CTTAACCGAG
ATTATGGGCG GCACAGTTGA GCATGTTGAA AACGCGGCCG AAATCGGGAT GGAGCACAAC
CTAGGTTTAA CCTGCGATCC CGTTGGCGGC TTGGTACAAG TCCCTTGTAT TGAACGTAAT
GCCATGGGCG CCATCAAGGC GATTAACGCA TCACGTATGG CGCTACGCGG CGACGGTAAC
CACAAGGTGT CACTGGATAA AGTGATCAAA ACCATGATGG ACACCGGTAA AGATATGCGT
AGTAAATACA AAGAAACCGC TAAGGGTGGC CTCGCGGTAA ATATTGTAGA GTGTTAA
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| Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGKIFM QHLADSGQIG QIDELRAELF GSLGQTGKGH
GTGKAVILGL MGEDPETVDT DSIDGILEHV SKSETLTISC GKVVKFTRED GITYHRRKSL
PAHANAMTLY AYSKGECIFE RTYYSVGGGF ILDEDEINQR NASPASQIES APYDFNSSAQ
LLELCTEHGL SISSLMMANE LSLASEEEVK AKLWNIWQTM KTCIERGYQK EGILPGGLKL
RRRAPALYRR LKAEGRNNVD PLTAMDWVDL FALSVNEQNA AGDRVVTAPT NGAAGIIPAV
LCYYDTFVQE VDIDVCARYL LTAAAIGILY KKNASISGAE VGCQGEVGVA CSMAAGALTE
IMGGTVEHVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGAIKAINA SRMALRGDGN
HKVSLDKVIK TMMDTGKDMR SKYKETAKGG LAVNIVEC
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