Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2245 |
Symbol | dnaQ-1 |
ID | 1169977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2360593 |
End bp | 2361231 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637344094 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | NP_717841 |
Protein GI | 24373798 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAAA CACCCGTCTA CACACCCGCC AATACCCTTG TGGTGCTCGA TTTTGAAACC TCGGGACTCT CACCAAACCA GGGTGCCCGT GCCATTGAGA TTGGCGCGGT ATTAATTGAG CAAGGCCAGA TTACTACGCG TTTTTCAGAA TTAATGAATC CCGGTTTTCG GATAAACGCC TTTATTGAAG ATTACACCGG GATCAGCAAT CAAATGCTCG CCCACGCGGC GCCCTGTGCG GAGGTAATGG CACGCTTTGC AGAATTTATC GGCAAGCATC ATCTGGTTGC CCATAACGCC GCCTTCGATC AGCGGTTTCT TGATGCCGAA TTTGCTCATA TCGGTCACCA ATATTCAGGT CAATTTGGTT GTTCATTACT GCTGGCAAGA CGTTTATACC CTGAAGCCAT CAATCATCAG TTGGCAACAT TAGTACGCCA TAAGCAGCTA CCGAACAATG GCACTTTCCA CCGTGCGCTT GCGGACGCGG AAATGACGGG ACATTTATGG CTACGAATGC TGGCGGATCT GAAACAGGAT TTTGCGATTG TAGAACCGCC CTTTAGCCTA ATGCAAAAAG TGATGAGCAA GAGTAAAGCC GAAGTACCTA AGTTTCTCCG TCAGTACGCA AGGGCTTAA
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Protein sequence | MPKTPVYTPA NTLVVLDFET SGLSPNQGAR AIEIGAVLIE QGQITTRFSE LMNPGFRINA FIEDYTGISN QMLAHAAPCA EVMARFAEFI GKHHLVAHNA AFDQRFLDAE FAHIGHQYSG QFGCSLLLAR RLYPEAINHQ LATLVRHKQL PNNGTFHRAL ADAEMTGHLW LRMLADLKQD FAIVEPPFSL MQKVMSKSKA EVPKFLRQYA RA
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