| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2238 |
|---|
| Symbol | ptsH |
|---|
| ID | 1169972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 2354978 |
|---|
| End bp | 2355235 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637344089 |
|---|
| Product | phosphocarrier protein HPr |
|---|
| Protein accession | NP_717834 |
|---|
| Protein GI | 24373791 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
|---|
| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAA AATCTGTCAC TATCACTGCA AAACATGGTA TTCATACTCG CCCAGCCGCA
CTGTTGGTGA AAGAAGCGAA GACCTTCGAT TGTGACGTTT TGGTTGAATG TAATGGCAAA
CAAGCAAGCG CCAAAAGCTT GTTTAAGCTA CAAACTTTAG GTTTGTACCA TGGTGTCACC
GTGAGAGTTT TCGCCGAGGG AGAGCAGGCG CAGGAAGCCG TCGAAAAAGT CTCGACTTTG
TTAATCACCT TAAGTTAG
|
|---|
| Protein sequence | MYEKSVTITA KHGIHTRPAA LLVKEAKTFD CDVLVECNGK QASAKSLFKL QTLGLYHGVT
VRVFAEGEQA QEAVEKVSTL LITLS
|
|---|
| |