Gene SO_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2228 
Symbol 
ID1169964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2345116 
End bp2345532 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content47% 
IMG OID637344082 
ProductCBS domain-containing protein 
Protein accessionNP_717825 
Protein GI24373782 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAA TTAAAATTCG CGACCATATG GACCGTCAGC CCGTGCTGCT GCGCGCCAAT 
ATGTCACTGG CGACGGCAGT TGAAAAACTG TTAGACAATA ACAAGATGGG GGCTGCGGTG
GTGGATGATA GTGGCAATTT GGTGGGATTT TTATCCCAGC AAGACTGCTT AGCTGTCATG
TTAAAGAGCA GCTATCACTG TGACTTGACC TCAGTGGTGA AGGATTGTAT GCGTACTGAA
GTGCTGTATG TCGGTCCTGA TGAGAGTATT TTACAACTCG CGGAGCAGAT GCTGGGCGCT
AAGCCAAAGA TCTATCCTGT GGTGGATAAT GGCAAAGTCA TCGGCACAAT CAATCGTACC
AATGTGTTAA GAGCAATGAA TGTGTACATG CAGCAATGTT ATCTTGCGCC CGCTTAA
 
Protein sequence
MDSIKIRDHM DRQPVLLRAN MSLATAVEKL LDNNKMGAAV VDDSGNLVGF LSQQDCLAVM 
LKSSYHCDLT SVVKDCMRTE VLYVGPDESI LQLAEQMLGA KPKIYPVVDN GKVIGTINRT
NVLRAMNVYM QQCYLAPA