Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2223 |
Symbol | |
ID | 1169960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2338802 |
End bp | 2340865 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637344078 |
Product | peptidase, putative |
Protein accession | NP_717820 |
Protein GI | 24373777 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACATAA CAATGAAAAT AGCTCCTCTC CTATTGGCGC TTGGCGCCGC AGGTTTGGCC TGCTGCGCCC ACGCAGCCGA TCCTAAGCCT TTTACTGTGC AACAGCTGGT TAAACTCAAT AAATTGCATT CAGCCGTGGT ATCCCATGAC GGTACAAAAT TGGTTTACGG CCTGAAAACC GTTAATGACA AGGGAGAGGC AAGCTCGGAT TTATATCTTC TCGATCTGAC GCAAGCAGAC GCGAAACCGC TGCAGCTGAC ATCAGCAGCG GGTACAGAGC ACGATATCAG CTTTGCAAAC GATGACAAAT CGATTTATTT CCTCGCCAGC CGCAGCGGTT CAAGCCAACT GTTCCAACTG CCATTAACCG GCGGTGAAGC GCAGCAAGTT TCTGATTTAC CACTTGATAT CGATGGGTAC AAACTCTCAA ATGATGGCAA GCAAATCGTG CTCAGCATGC GGGTCTTCCC AGAGTGTAAA GACTTAGCGT GCTCAAAAGA CAAATTTAAG GCTGAAGAAG AGCGTAAATC GACGGGCCGT GAATACAAGC AGTTGATGGT GCGCCACTGG GATACCTGGG AAGATCACGC CCGTAATCAC TTATTTGTCG GCACTCTCAA CGGTGAGAAG CTGACAAAAG TTGTCGATAT CACCCAAGGT TTAGACACAG AAACCCCACC TAAGCCATTC TCAGGCATGG AAGAAGTGAC TTTCACCCCT GATGGCCAAT ATGTGGTTTA CAGCGCTAAA GCGCCCAGCA AAGATCAAGC TTGGACCACC AATTACGATC TGTGGCAGGT GAGTGTGAAT GGTGGCAAAG CCACTAACTT AACCGCCGAT AACATTGCTT GGGACGCGCA GCCGACTTTC TCTAGCGATG GCCGTTATAT GGCCTATCTC GCCATGACCA AGCCCGGTTT TGAAGCCGAC CGTTATCGCA TTATGCTGCG TGATACCAGT ACGGGACAGT CGAAGGAAGT GGCGCCGCTG TGGGACAGAA GTCCAAGCTC GCTGATGTTT GCACCGGACA ACCGTACTCT GTATGTGACG GCGCAGGATA TCGGCCAAGT GTCTATTTTT AAAGTGAATA CTCAATTTGG TGATGTGCAG TCTGTCTATA GCGACGGCAG TAATAGCCTG ATTGCGATCG CCGACGATCA ACTGATTTTC GACAGCAAAA CCTTAGTTGA GCCGGGCGAT CTGTACCGCA TCAACACCGA CGGCCAAGGC CTGAAACGTC TAACCGAAGT CAACAAAGAC AAACTGGCCG AAATTAAATT CGGTGAATTC CAACAATTTA GCTTTAAGGG TTGGAATAAC GAAGATGTTT ACGGCTACTG GATCAAACCT GCCAACTACC AAGAAGGCAA AAAGTATCCG ATTGCTTACC TAGTCCACGG TGGTCCGCAA GGTTCATTTG GTAACGGTTT CAGTGGTCGT TGGAATGCCC AGTTATGGGC CGGTGCGGGT TATGGCGTTG TGATGGTGGA TTTCCACGGT TCAACCGGTT ACGGCCAAGC CTTTACCGAT TCTATTAGTC AAGATTGGGG CGGTAAGCCA TTAGAAGACT TACAAAAAGG TCTGGCAGCG GTGAGCCAAC AACAAAAATG GCTCGATCCA CAAAATGCCT GTGCCTTAGG TGGCTCTTAC GGCGGCTACA TGATGAACTG GATCCAAGGT AACTGGAACG ATGGCTTTAA GTGCCTAGTT AACCACGCGG GTCTGTTCGA TATGCGCTCC ATGTACTACG TGACCGAAGA AGTCTGGTTT CCAGAACATG AATTTGGTGG TACTTATCAG GATAACAAAG CGTTATATGA GAAGTTTAAC CCAGTTAACT ATGTGGAAAA CTGGAAAACC CCGATGTTGG TTATCCATGG CGAGAAGGAT TTCCGTGTGC CTTATGGTCA AGGTTTAGCT GCATTTAGCT TTATGCAGCG TAAAGGTATT CCATCTGAGC TGCTGATTTA CCCTGATGAA AACCACTGGA TCTTAAAGCC AGAAAACCTA GAACAATGGT ATGCGAACGT GTTCCGTTGG ATGGACAGCT GGACGAAAAA GTAA
|
Protein sequence | MDITMKIAPL LLALGAAGLA CCAHAADPKP FTVQQLVKLN KLHSAVVSHD GTKLVYGLKT VNDKGEASSD LYLLDLTQAD AKPLQLTSAA GTEHDISFAN DDKSIYFLAS RSGSSQLFQL PLTGGEAQQV SDLPLDIDGY KLSNDGKQIV LSMRVFPECK DLACSKDKFK AEEERKSTGR EYKQLMVRHW DTWEDHARNH LFVGTLNGEK LTKVVDITQG LDTETPPKPF SGMEEVTFTP DGQYVVYSAK APSKDQAWTT NYDLWQVSVN GGKATNLTAD NIAWDAQPTF SSDGRYMAYL AMTKPGFEAD RYRIMLRDTS TGQSKEVAPL WDRSPSSLMF APDNRTLYVT AQDIGQVSIF KVNTQFGDVQ SVYSDGSNSL IAIADDQLIF DSKTLVEPGD LYRINTDGQG LKRLTEVNKD KLAEIKFGEF QQFSFKGWNN EDVYGYWIKP ANYQEGKKYP IAYLVHGGPQ GSFGNGFSGR WNAQLWAGAG YGVVMVDFHG STGYGQAFTD SISQDWGGKP LEDLQKGLAA VSQQQKWLDP QNACALGGSY GGYMMNWIQG NWNDGFKCLV NHAGLFDMRS MYYVTEEVWF PEHEFGGTYQ DNKALYEKFN PVNYVENWKT PMLVIHGEKD FRVPYGQGLA AFSFMQRKGI PSELLIYPDE NHWILKPENL EQWYANVFRW MDSWTKK
|
| |