| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2222 |
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| Symbol | |
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| ID | 1169959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2337038 |
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| End bp | 2338588 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637344077 |
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| Product | fumarate hydratase, class I, anaerobic, putative |
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| Protein accession | NP_717819 |
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| Protein GI | 24373776 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCTC ACCATGAAAC GTCTGAAAAT GTAGTGATTA AACAAGCCGA CTTCATTGAA
AGTGTGGCGG ATGCCCTGCA ATACATCTCC TACTACCACC CCAAAGATTT TGTCGATGCC
ATGAGCGAAG CTTATGAGCG TGAACAAAGT GCTGCGGCGA AGGATGCAAT TGCACAAATT
TTGATTAACT CGCGCATGTC TGCCGAAGGC AAACGTCCAC TGTGCCAAGA CACGGGTATC
GTGACCACGT TTGTTAAAGT GGGTATGGGG GTTAAGTGGG ATAAAACTGA TATGACCATT
CAACAAATGG TCGATGAAGG TGTGCGTCGT GCTTACACCA ACCCAGATAA TCCACTGCGT
GCATCAATTG TGGCGGATCC TGCAGGTAGC CGTAAAAACA CCAAAGACAA CACCCCATCA
GTTGTGCATA TCGATATGGT GCCAGGTAAT CATGTTGAAG TTGCTATCGC AGCAAAAGGC
GGCGGCAGTG AAAACAAAGC TAAGATGGTG ATGTTAAACC CATCGGACGA TATCGCCGCT
TGGGTTGAAA AAACGCTGCC CACCATGGGC GCGGGCTGGT GTCCTCCTGG TATGCTCGGT
ATCGGTATTG GCGGCACCGC TGAAAAAGCG GCCGTATTGG CCAAAGAAGC CCTGATGGAA
AGCGTGGATA TCCATGAGTT AATGGCGCGC GGTGCACAAA CTACAGAAGA AAAACTGCGT
TTAGATATCT TTGAACGTGC CAACAACTTA GGTATTGGTG CGCAGGGGCT TGGCGGGTTA
ACCACGGTTT TAGACGTGAA AATCAAGTCT GCACCGACCC ACGCGGCATC AAAACCTGTG
GTGATGATCC CCAACTGCGC CGCAACTCGT CACGTGCATT TCCACTTAGA CGGCACGGGT
CCTGCTGATC TTGCGCCGCC ATCACTCAGC GACTGGCCAG AAATCACCCG CGAAGTGGGC
AGCGATGTGC GCCGTGTTAA CTTAGACACA GTCACACAAG CCGATATCGA ACAGTGGCAG
AGCGGTGAAA CCCTGCTGCT GAGCGGTAAA ATGCTCACCG GCCGTGACGC TGCCCATAAA
CGTATCCAAA GCCTGATTGA AAGCGGCGAA GGTTTACCAG AAGGCGTCGA CTTTACTGGT
AAGTTTATTT ATTACGTTGG CCCAGTTGAC CCCGTGGGTA ATGAAGTGGT GGGGCCTGCA
GGACCTACAA CCGCGACCCG TATGGACAAG TTTACTGACC TGATGCTGGA TAAGACTGGC
CTGATGGGCA TGATCGGTAA GGCTGAGCGT GGTCCTGCAA CCGTTGAATC TATCAAGAAG
CACAAAGCGG TGTACTTGAT GGCTGTTGGC GGCGCGGCTT ACTTAGTGTC AAAAGCCATT
AAAAAATCCC GTGTGGTAGC TTTTGCCGAT TTAGGTATGG AAGCGATTTA CGAGTTTGAT
GTGCAGGATA TGCCAGTCAC TGTAGCGGTT GACTCAAACG GCGTGAATGC CCATGAAACG
GGTCCTGCGA TTTGGAAAGT GAATATCGCT AACGCGAATG CAAAAGCCTA A
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| Protein sequence | MSSHHETSEN VVIKQADFIE SVADALQYIS YYHPKDFVDA MSEAYEREQS AAAKDAIAQI
LINSRMSAEG KRPLCQDTGI VTTFVKVGMG VKWDKTDMTI QQMVDEGVRR AYTNPDNPLR
ASIVADPAGS RKNTKDNTPS VVHIDMVPGN HVEVAIAAKG GGSENKAKMV MLNPSDDIAA
WVEKTLPTMG AGWCPPGMLG IGIGGTAEKA AVLAKEALME SVDIHELMAR GAQTTEEKLR
LDIFERANNL GIGAQGLGGL TTVLDVKIKS APTHAASKPV VMIPNCAATR HVHFHLDGTG
PADLAPPSLS DWPEITREVG SDVRRVNLDT VTQADIEQWQ SGETLLLSGK MLTGRDAAHK
RIQSLIESGE GLPEGVDFTG KFIYYVGPVD PVGNEVVGPA GPTTATRMDK FTDLMLDKTG
LMGMIGKAER GPATVESIKK HKAVYLMAVG GAAYLVSKAI KKSRVVAFAD LGMEAIYEFD
VQDMPVTVAV DSNGVNAHET GPAIWKVNIA NANAKA
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