Gene SO_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2213 
Symbol 
ID1169949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2324798 
End bp2326420 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content47% 
IMG OID637344068 
Productoligo-1,6-glucosidase 
Protein accessionNP_717811 
Protein GI24373768 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCAT CTATTAACAC CAGCAGCCAC ACGACCAGCG TCAGCGGAGC GGATAATGGC 
AACTACCGTT TTGCGCTAGT GTCACTGACC TCACTGTTTT TTATGTGGGG ATTTATCACC 
TGTTTGAACG ATATCCTGAT CCCCCATCTT AAGGCGGTGT TTTCACTCAA CTACACCCAA 
GCTATGCTGA TCCAGTTTTG TTTCTTTGGG CGTATTTTTT GGTGTCGATT CCCGCGGGTC 
AACTCGTTAA ACGACTTGGC TATCAAAAAG GGATTGTGA
 
Protein sequence
MSELTWWRGA VIYQIYPRSL LDTNGDGVGD LRGIITKLDY IASLNVDAIW ISPFFKSPMA 
DFGYDISDYR EIDPLFGSMQ DFDELIEKAH QRGIKVIIDQ VLSHTSDQHA WFIESRESRT 
NPKADWYVWA DPREDGTPPN NWLAIFGGCA WEWEPRRQQY YLHNFLRSQP DINFHNPDVR 
QAVLDNVEFW LKKGVDGFRL DAITFCFHDE LLRDNPAKPK EKRQGRGFSE DNPYAYQYHY 
YNNDRPQTIQ FIEALRQLIN RYPGTVTLGE VSAEDSLAVM AAYTKGDDRL HMAYSFELLT 
DDYSAAYIRQ TVEALENSIG DGWPCWAIGN HDVQRVASRW GRGKQTSDMA KMLNAMLCSL 
RGSVCSYQGE ELGLTEVPIE FHELQDPFGK TFWPMFKGRD GCRTPMPWEQ YADFSGFSQV 
SPWLPIAAAH RALAVDLQEA DCHSVLHGYR QFLAWRKCYP ALITSEIEFL DAPEPLLVFV 
RKLGEQKLLV CFNLLDAETQ LSLTGLKLQQ ELAGHGLKTA HRQGDSLIFS AYASFYALLA