Gene SO_2208 details

Gene Information

• Locus tag: SO_2208
• ID: 1169944
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2320084
• End bp: 2320599
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637344063
• Product: phosphotyrosine protein phosphatase
• Protein accession: NP_717806
• Protein GI: 24373763
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0394] Protein-tyrosine-phosphatase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGAGG ATGCTAAGTT GTTAGAAGAT AAAGCGTTAA AAACACAAAA TATACGACGT 
ATCTTAATGG TGTGTATGGG CAATATTTGC CGTTCACCCA CCGCCGAGGC GGTTTGTCGC 
GCCAAAATTC GCCAACGTCG TCTTGATATT GAAGTCGATT CAGCGGGCAC CATTGGTTAT 
CACCAAGGAG ATAACCCCGA CAGTCGCGCC ATGGCCGCAG GCAAAAAACG GGGATTGAGT 
TTCGAAGCAA TACGTGCAAG GCAAGTTGTT GATGCCGATT TTGAGCATTT TGATCTGATT 
TTAGCGGCCG ATAAAAGCAA TTTAGTCGAT TTACAACGCC GTTGCCCACC CGAATATCGG 
TACAAATTAA GGCTAATGTT ATCCTTCGGA AATAGTGAGA TTGATGAAGT CCCCGATCCC 
TATTACGGCG ATAGCCAAGG ATTTGAATTA GTCCTCGATT TGCTTGAGCA GAGTATGGAC 
GCGTTATTAG ACCTATTAGC GGGAAAAACG TATTAG 

 

Protein sequence

MREDAKLLED KALKTQNIRR ILMVCMGNIC RSPTAEAVCR AKIRQRRLDI EVDSAGTIGY 
HQGDNPDSRA MAAGKKRGLS FEAIRARQVV DADFEHFDLI LAADKSNLVD LQRRCPPEYR 
YKLRLMLSFG NSEIDEVPDP YYGDSQGFEL VLDLLEQSMD ALLDLLAGKT Y