Gene SO_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2200 
Symbol 
ID1169937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2314957 
End bp2315949 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content44% 
IMG OID637344056 
Productribosomal protein S6 modification protein, putative 
Protein accessionNP_717798 
Protein GI24373755 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR00768] alpha-L-glutamate ligases, RimK family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGGGT GGATTTTATA TAAAGAAACC GCGACTCAGC TAAAACCTGA ATGGTATGAA 
ATTGAACGTC TATTGGCGGC TGCCAAAGCC GACAATATTG AATTAGAAGT TTATGCTCCG 
GATGAGTTTG ATCTCACCGT GACGAGAGAA GACAACAAAA GTATTTTGTT AAACGGGCAA 
CCCGTTGAAT TACCAGATTT TATCATTCCA AGAATGGGTT CTGGTACCAC CTATTTTGCG 
TTGGCGATCA TTCGCCATTT AGAACGTTTA GGGGTGTACT GCCTGAATCC TTCTAAAGCC 
ATTGAGATTG TTAAAGATAA ACTCTTTTCC CAGCAATTGC TGGCCGAGAA GAATTTACCC 
ACCCCTAAAA CCATGTTGGT CAAATTCCCA GTTGATATTG ACTTGGTTGA GCGCCATTTG 
GGGTTTCCCG TGGTGATTAA AACACTCTCA GGCTCTCAGG GTAGCGGCGT GTTTTTATCT 
CATAAGGCCC GTGAATTTGA TGACTTAATG CAACTAATTG AAGCGACAAA TAAAAACGCC 
AACATTATTT TGCAAGAGTT TATCGCCAAT AGTCATGGCC GCGACTTGCG CGTTTTTACC 
ATTGGCGGGC GTGTTGCAGG TTGCTACGAG CGACGTGGAC AAGAAGACAG CTTTAAAGCC 
AATGTGAGCG CAGGTGGTTC GGCAAGACCA TTTGATATCA CCCCTGAAAT CGAATGGCTA 
GCCACACAAA CCGCCAATAT TCTGGATTTA GATGTGGCGG GTATCGATTT ATTATTTGAT 
AACGGCCATT ACAAGATCTG TGAAGCTAAC TCTTCCCCAG GTTTTGAAGG CTTAGAATCT 
TGCTTAAATG TGGATATTGC CGCACAAATT TTGCATTTTA TTCGCATTCG TTTGGGGATG 
TTTAACAAGG ATGAAAAAAA CAGCGATCCA CAACTCACTC ACGCTGGGCC GGCTTTAGCC 
AACAATGTAA CAAGCTCAAA GGCGGCGGAA TAA
 
Protein sequence
MRGWILYKET ATQLKPEWYE IERLLAAAKA DNIELEVYAP DEFDLTVTRE DNKSILLNGQ 
PVELPDFIIP RMGSGTTYFA LAIIRHLERL GVYCLNPSKA IEIVKDKLFS QQLLAEKNLP 
TPKTMLVKFP VDIDLVERHL GFPVVIKTLS GSQGSGVFLS HKAREFDDLM QLIEATNKNA 
NIILQEFIAN SHGRDLRVFT IGGRVAGCYE RRGQEDSFKA NVSAGGSARP FDITPEIEWL 
ATQTANILDL DVAGIDLLFD NGHYKICEAN SSPGFEGLES CLNVDIAAQI LHFIRIRLGM 
FNKDEKNSDP QLTHAGPALA NNVTSSKAAE