| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2196 |
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| Symbol | |
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| ID | 1169933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2309797 |
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| End bp | 2310483 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344052 |
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| Product | LPXTG-site transpeptidase family protein |
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| Protein accession | NP_717794 |
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| Protein GI | 24373751 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGCGA AAGCACACTT TGCCCAATAT TTGATTGAAC AGGCATGGGC TAAAACCTTA
ATTGATGGGC AGTCACATAA ACCTTGGTCA TGGGCTGATA CCTATCCCGT TGCTAAACTC
TCTATTGATC AAGCCAATAT GCCGACTCAC TTCGATGGCC CAGCATCGAA TGATAGTTTA
TATGTGTTAG CGGGAGCCTC AGGCAGAAAT CTGGCCTTTG GACCCGGGCT TGTGTTGTCG
AGTGCGTCAG CTGGTGAGCG CGGTAACACA GTGATAGCAG GGCATAGGGA TACGCATTTT
GCGATATTAA AGGGGATGAC GGTCGGTAGA CGACTCGCAC TGCAAACCGC TGCGGGTAAA
GAGATTGTTT ACCAAGTGGT GGCGACTAAG GTGGTGCATG AATCGCAAAC TGAGTTGATG
GCACCGAGTG ACGATAATCG TTTAACGCTC ATCACTTGTT ATCCCTTCGA TGCGTTGCAA
GGTGTCGCTG AACTGCGTTT CGTGGTGCAG GCTGTGCCCA TTATTCAAGG GGAGGATGTG
ATTCAAGTGT CAGAGGAAAC CTTAGTATTA GAATCGGCTG ATATGGCTCA GCAGCTAGGG
CGTGTTGACG TTTCAGGGTT ATTTTTGCAG CAGTTTGGCT GGCTTTTATG CAAGGCAAAG
TCCGTGCTGT GTAGTTATTC TACATAA
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| Protein sequence | MQAKAHFAQY LIEQAWAKTL IDGQSHKPWS WADTYPVAKL SIDQANMPTH FDGPASNDSL
YVLAGASGRN LAFGPGLVLS SASAGERGNT VIAGHRDTHF AILKGMTVGR RLALQTAAGK
EIVYQVVATK VVHESQTELM APSDDNRLTL ITCYPFDALQ GVAELRFVVQ AVPIIQGEDV
IQVSEETLVL ESADMAQQLG RVDVSGLFLQ QFGWLLCKAK SVLCSYST
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