| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2187 |
|---|
| Symbol | |
|---|
| ID | 1169923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 2298229 |
|---|
| End bp | 2299185 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637344044 |
|---|
| Product | ISSod11, transposase |
|---|
| Protein accession | NP_717786 |
|---|
| Protein GI | 24373743 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTT CATCGTATTT ATTAAAAGCT GGCGTCGATT ACCCTACAAA TTGGGACGAA
TTTGTTGATT GGTTTCATGA TGAACAATCT TGCACTAGCT ACCTTTACGC ACTTCGTTGG
CCAAACGGAT TCATTTGCCC AAGCTGTTCG AGCCATCAAT CACCTTATCA GTTAAGTAAT
GGCAAGTTAA AATGTCATGC TTGCCGTTTT CAGTGTTCAG TAACATCAAG TACACTTTTT
GACAAAACAA GAACCCCCAT GAAAAGTTGG TTTGCAGCTG TCTGGTTTAT TACAAATCAA
AAGAATGGGG TCAGCGCTCT TGGAGTCCAA AGGCTATTAG GTCTTGGGAG TTATCAAACT
GCTTGGTCTT TAATGCACAA GTTAAGATAT GCCATGGTTG ACCCTGAAAG AGATAAACTG
TCCGGCATCG TAGAGGTTGA CGAAACATTA ATAGGTGGGG TCATTCCAAA ATCATCTATT
AAAAATCAAC AGGGTAAGCG TAAAGCTATA GTTTTGGTGG CTGTTGAGCT GCTATCACCC
TCTGGATTTG GGCGGATACG TTTAAGGCAA GTAGAAAGTG CAACTAAAGA ACATATCCAT
CAATTCATTC AAGATGTAAT AGAGCCTGGT AGCACAATTT GTAGTGATGG TTCTCAAGCA
TACAAGCAAA TAGACAAAAA AGGATATAAG CATAATCGGA TGGTGCATTT AGGTTCATCT
GTACCTGCAC ATGAAACAAT GGCTGGGGTG CATCGAGTCT CATCATTATG TAAAAGATGG
CTTTTAGGTA CGTATCAAGG TGCGGTAAAG GCTAAGCAAC TTGATTATTA TTTAGATGAA
TTTACATTTC GCTTCAACAG AAGAAAGTCA GATTCTCGGG GATTATTATT CTACAGGTTG
CTTGAGCAAG CAGTGCGTTC TAAGCCGATA ACGTACCAAT CAATTAAAAA TCGATAA
|
|---|
| Protein sequence | MKTSSYLLKA GVDYPTNWDE FVDWFHDEQS CTSYLYALRW PNGFICPSCS SHQSPYQLSN
GKLKCHACRF QCSVTSSTLF DKTRTPMKSW FAAVWFITNQ KNGVSALGVQ RLLGLGSYQT
AWSLMHKLRY AMVDPERDKL SGIVEVDETL IGGVIPKSSI KNQQGKRKAI VLVAVELLSP
SGFGRIRLRQ VESATKEHIH QFIQDVIEPG STICSDGSQA YKQIDKKGYK HNRMVHLGSS
VPAHETMAGV HRVSSLCKRW LLGTYQGAVK AKQLDYYLDE FTFRFNRRKS DSRGLLFYRL
LEQAVRSKPI TYQSIKNR
|
|---|
| |