| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2180 |
|---|
| Symbol | |
|---|
| ID | 1169918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 2291918 |
|---|
| End bp | 2292853 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637344039 |
|---|
| Product | M24/M37 family peptidase |
|---|
| Protein accession | NP_717780 |
|---|
| Protein GI | 24373737 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAACG CTGTTCCAAT GATGTTAAAA GCCTTGCCAT TCACGCCATC CCGCGCGTCA
TTTCGCTTAT CTCCTATGGT GACATCCAGC AAATTTAAGG CGACGTTTTT TACGCTCTTA
ACCCTGTTTA GCTTAACGGC TCAGGCACAG GTGAGTTTTG AAGGCAAATT TGAGCAAGGG
GCGTTGATCC GAGCCAAAGT TCCCGCAGGT ACGCAAGTGA CTCTTAATGG CGAGGCCGTA
AAAGTTACGC CTGATGGCCA TTTTGCCTTT GGTTTTGATA GAGATGCAGA GCTTACTCAA
CAGCTTACCT TAGTGTATCC CGATGGCTTG ACTGAGGTTA AACCCCTCAA TATCGCTAAG
CGGGAATACA ACATTCAGAG CGTTAAAGGC ATTAGTAATA AGATTATGAA GCCTGATCCC
GTCGCGCAGG AGCGAGCCGC AAAGGATACG GCGCAGGTCA AAGCGGCACG CGGCACCTTT
AGCGAACAAA CCGCGTTTTT ACAGCCGTTC ATTTGGCCAT TAACCGGCAG GATCTCCGGT
GTGTATGGCA GTCAGCGCAT CTATAACGAT GTGCCAGGCA ATCCACATTT TGGCGTCGAT
GTGGCCGCGA AAACCGGCAC AGTGGTGGTA GCGCCCGCTG ATGGGGTGAT TAGTCTTTCT
GTGCCCGATA TGTTTTATTC GGGTGGGACC ATGGTTATCG ACCATGGTTA TGGTGTCAGT
TCGAGCTTTT TGCACCTAAG CAAACTTTAC GTCAATGCCG GTGAAACCGT TAAGCAAGGG
CAAGCTGTGG CGGAAGTCGG CGCCACTGGG CGGGCAAATG GCCCACACTT GGATTGGCGA
GTGAACTGGT TTCAAATGCG CCTTGATCCG ACCAGCATAG TGCCACCGAT GGCGACGGTA
TTGGCGGCGG AAAAAGCGAA AAAAACCGCC AAATAA
|
|---|
| Protein sequence | MLNAVPMMLK ALPFTPSRAS FRLSPMVTSS KFKATFFTLL TLFSLTAQAQ VSFEGKFEQG
ALIRAKVPAG TQVTLNGEAV KVTPDGHFAF GFDRDAELTQ QLTLVYPDGL TEVKPLNIAK
REYNIQSVKG ISNKIMKPDP VAQERAAKDT AQVKAARGTF SEQTAFLQPF IWPLTGRISG
VYGSQRIYND VPGNPHFGVD VAAKTGTVVV APADGVISLS VPDMFYSGGT MVIDHGYGVS
SSFLHLSKLY VNAGETVKQG QAVAEVGATG RANGPHLDWR VNWFQMRLDP TSIVPPMATV
LAAEKAKKTA K
|
|---|
| |