| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2164 |
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| Symbol | |
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| ID | 1169904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2277675 |
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| End bp | 2278538 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637344025 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | NP_717764 |
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| Protein GI | 24373721 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCAC TTCTGCAACA ATTCCATGAT GAGATTAGTT TACGTGGTTA CTCGGCCCGA
ACGCGTAACG CTTATTTGTA TGCCATCACC CAACTTCAGC ACTATGCAAA CCAACCGCTC
GATAACATTA CGGATGAGCA GCTTACGGCT TATTTCCGTT ACTTAAATCT TGAGTGGCAT
CATTCCAGAG CTACTTTAAA GTTACAGCTT AATGGCATTC ATTTTTTCTA TGAACATGTC
CTAAAACGTG ACTTTACGAT TCAGCTAAGT TTACCGAAAC GTCCGCACAA ACTGCCGCAA
TTGCTTAGTT GCCAAGATAT CGCGGCACTG CTGTACCACT GTCAAAACCT GAAACAACGC
GCTATGTTGG CGCTGTGTTA TGGTTGTGGT TTGCGTGTCA GTGAGTTAAC CCATATTAAG
GTTGCTGATA TCGATGGGCA GCGGCAGTTA CTCAAAGTGT GTCAAGGCAA GGGTGCCTGC
GACCGCTGGG TGATACTCTC ACCGACTTTA CTCATCCTGT TGCGTCAGTA TTGGCAAGCG
TATCATCCCG TCGAATGGTT GTTTGCCTCG ACCTATCATG ATGTGGTTTA TCCGCTGCAT
GAGTCGACCT TTCGTAAAGC GTTAGCGAAG GCGGCCCGCT TAGCGAGTAT CACTAAGCCA
TGCAGTCCAC ACAGCCTAAG GCATGCTTAT GCAACCCATC AATTACAAGC GGGTATGCCA
CTTCATCAAT TACAGGCTCA GCTTGGGCAT CACAGTATCA AGTCTACTGA ACGCTACTTG
CATTGGTCGC CGGAATTAGG TCATCAAGGC TGTGACTTGC TAGCAAGTCT TGGGGGAATG
CCATGGCAAC CTCCTACCAT TTAA
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| Protein sequence | MSSLLQQFHD EISLRGYSAR TRNAYLYAIT QLQHYANQPL DNITDEQLTA YFRYLNLEWH
HSRATLKLQL NGIHFFYEHV LKRDFTIQLS LPKRPHKLPQ LLSCQDIAAL LYHCQNLKQR
AMLALCYGCG LRVSELTHIK VADIDGQRQL LKVCQGKGAC DRWVILSPTL LILLRQYWQA
YHPVEWLFAS TYHDVVYPLH ESTFRKALAK AARLASITKP CSPHSLRHAY ATHQLQAGMP
LHQLQAQLGH HSIKSTERYL HWSPELGHQG CDLLASLGGM PWQPPTI
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