| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2156 |
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| Symbol | |
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| ID | 1169897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2269782 |
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| End bp | 2271803 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637344018 |
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| Product | alpha amylase family protein |
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| Protein accession | NP_717756 |
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| Protein GI | 24373713 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCGC AATTAATGAC GATTCAAGCG ACTGCTTCAC AAACAACGGC TTTACAAGCA
ATCGTTTCTA AAACAATGCC TTCAAATCTA AATACAGCCG AAGCAGATAC CAGTCTTGCC
CAAAACAGCA CTGAGCAAAC CGACAGCTTT AAACCTGTGG TTTATCAGAT TTTTACTCGT
CTCTATGGCA ATAAGAATCC CACTAATAAC CCCTGGGGTA CCATTAGCGA AAACGGCGTG
GGAAAATTTA ATGATATAGA TGACAGCGCC CTCAAAAGCA TCAAAGCCTT AGGCGTTACC
CATGTGTGGT ACACGGGCGT GCCCCACCAC GCCTTAATTG CCGATTACAG TGTAATTGGC
GTAAGCAGCG ATGATCCCGA TGTGGTCAAA GGACGAGCGG GTTCGCCCTA TGCAGTTAAA
GATTATTACA ACGTAAACCC CGATTTAGCG ATCAATCCAG CGAAGCGTTT ACAGGAGTTT
CAGGCACTTA TCGAGCGTAC CCACAAGCAA GGCTTAAAGG TGATTATCGA TATAGTACCT
AACCATGTAG CGCGTAATTA TCATTCTGTC ACTAAGCCGC AAGGCGTACG CGACTTTGGC
GAGGACGATA TTCAAACCGT AGAATATGCA AAGCATAATA ACTTTTACTA TGTGATTGAT
AATAATCAAG TTCATGGTTT TGAGGTGCCA GATTTACCCA AAAGCCTTAA ACCCTTAGAT
GGCGAATCGC ATCCCCTGAG TAATGGTCAA TTTAAGGAGA TCCCCGCCAA ATGGACGGGC
AACGGCTCAC GCCTCGCTAA ACCCGATATG AACGACTGGT ATGAAACCGT AAAAATCAAT
TACGGTGTCC GCCCCGATGG CAGCCATGAT TTCCCAGCAC TTCCGCCACG CTATGCCACA
CTCAGCGCCG AGCAGCACTA TGCTTTTTGG CAGCAACATA ACCATGAATT ACCTAACTCT
TGGATCAAGT TCAATCAAAT TTCCCAGTAT TGGTTAGCGA TGGGGGTTGA TGGATTTCGT
TACGATATGG CCGAAATGGT GCCAGTCGAG TTTTGGAGCT ATTTAAATAG TCATATAAAA
CATAGTTATC CCGATGCCTT TATCTTAGCC GAGGTCTACA ATCCTGCGTT GTATAGCGAC
TATATTCAAC TCGGTAAAAT GGATTACCTC TACGACAAGG TCGATCTTTA CGATACCCTC
AAAGCCATTA TGGCAGGGCA AAAAAGTACC GAGCTGATCG CCGCAGACCA AGCCAAAGTG
CAAGATATCG GCTCGCATAT GCTGCATTTT TTAGAAAACC ACGACGAACA GCGCATCGCC
AATGCCGCCT TTTTAGGCAC CTTAAGTGGT AATGCCTCAA CGGATGCGGT CGATCCCCGC
TACGCCCTGC CCGCCATGGT GGTGTCAGCA ACCTTGAGTA CATCACCCAC CTTGATTTAT
TTCGGCCAAG AAGTGGGAGA AGCGGCGACG CAAAACCTAG GCTTTGGCCA TGCTTCGCGC
ACCAGTATTT TTGATTATGC GGGCGTCCCC GCCCATCAGC GCTGGATGAA TAAAGGTAAA
TTTGATGGCG GCCAATCAAC GGCAACGGAA CTCGCTTTGC GGGCATATTA CCAAAAATTG
CTTAATCTCA GCACAGGCAA AAATGCGCCC GCACTCTTAG GGCAATATTA CTCGCTTGAT
GCCGCCAACC GCAGTGCAAG ACCTTCCACA ATGGATTCTC ATGGCAGCGC AACCGGTTAT
GATGACAGCA CCTTTGCCTT TGTTCGCTTT GAGGCAAATT CGACCAATAA AATGGGCCAG
AAGCTGATTA TTGTCAGTAA CTTTAGTCAA GTCCAAGCAA AATCGTTATT CCTTAAACTG
CCCAAATCAC TGATTGAGCA ATGGCAGTTA ACCGATGCGA CCTATCAGCT TAAGGATTTA
CTGGAGGACA ATGCGGCGCA GTTGATTGTC AAACAAGGTG AAGGACACAT TCAGGTGCAA
TTTGCACCAC TCTCCTCTGC CATCTTTGAA CTCGCCAATT AG
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| Protein sequence | MAAQLMTIQA TASQTTALQA IVSKTMPSNL NTAEADTSLA QNSTEQTDSF KPVVYQIFTR
LYGNKNPTNN PWGTISENGV GKFNDIDDSA LKSIKALGVT HVWYTGVPHH ALIADYSVIG
VSSDDPDVVK GRAGSPYAVK DYYNVNPDLA INPAKRLQEF QALIERTHKQ GLKVIIDIVP
NHVARNYHSV TKPQGVRDFG EDDIQTVEYA KHNNFYYVID NNQVHGFEVP DLPKSLKPLD
GESHPLSNGQ FKEIPAKWTG NGSRLAKPDM NDWYETVKIN YGVRPDGSHD FPALPPRYAT
LSAEQHYAFW QQHNHELPNS WIKFNQISQY WLAMGVDGFR YDMAEMVPVE FWSYLNSHIK
HSYPDAFILA EVYNPALYSD YIQLGKMDYL YDKVDLYDTL KAIMAGQKST ELIAADQAKV
QDIGSHMLHF LENHDEQRIA NAAFLGTLSG NASTDAVDPR YALPAMVVSA TLSTSPTLIY
FGQEVGEAAT QNLGFGHASR TSIFDYAGVP AHQRWMNKGK FDGGQSTATE LALRAYYQKL
LNLSTGKNAP ALLGQYYSLD AANRSARPST MDSHGSATGY DDSTFAFVRF EANSTNKMGQ
KLIIVSNFSQ VQAKSLFLKL PKSLIEQWQL TDATYQLKDL LEDNAAQLIV KQGEGHIQVQ
FAPLSSAIFE LAN
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