Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2149 |
Symbol | recC |
ID | 1169890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2259476 |
End bp | 2263288 |
Gene Length | 3813 bp |
Protein Length | 1270 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637344011 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | NP_717750 |
Protein GI | 24373707 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAGT TAATCCAATC CAACCAAATG GAAGTGCTCT GTGCCCATCT CGCTGCGTAT TTGCGCCAAC CGTTGCCCGG TGGCTGTTTA TTGCAAAGCG AGCATATTTT GGTGCAAAGC CCTGGGATGT CGACTTGGTT ACGCCTTGAG ATTGCAAAAC AAAATGGCAT TGCCGCCGCG CTTGAGTTCC CTTTGCCATC CAGTTTCATT TGGCAACTGT GTCACGATTT ACTGCCCAAT GTCCCCAAGG AAAACGCCTT TACTAAAGCG GCAATGACCT GGAAATTAAT GCAACTACTG CCTCGCCTAC TTGAGGAGGA ATCCTTTGGG CCGCTGCGGC ATTATTTAGG TCATATTGAG TCAAGCAGCC CCGACTCGAC CACAAAAAAT AATCAACTTG AAGCGTCAAA CTCAATCGCC GCCGATAATA TTAAGCTTTA TCAGCTCTGC GGTCGCATCG CCGATATCTT CGACCAATAT TTAGTTTACC GCCCCGACTG GATTGCCGCA TGGGAAGCCA ATGAACCACT CGATGCACTC AAATTAAATG AGGAACAACG CTGGCAACCT ATTCTTTGGC GGGCGCTGAT TGCCTTCAAC CGTGACGAAC TGCGTCAAAG CCATTACCAC AGGGCCAATT TACATCAGGA TTTAATTGCC GCGCTGGCTG ATAGCACCCA TTCCCTCGCC AAATTGCCTG AGCGTTTATT TGTGTTTGGC ATTTCGTCTA TGGCCCCACA AACCATAGAC GTGCTCCACC AGCTCGCGGC CCGAATTGAT GTCATCATCC TTAACCTCAG CCCATGCCAG CATTATTGGG GCGATATTAT CGATCCTCGG CATCGAGCGC GAATGGCGCT GCAATATGCT GGCAAACGCC AATTGGCCGA GCAATGGGAA GATAAACTCG AGGTCGGCAA TCCGCTGCTT GCCAACAATG GCAAAATGGG CCGTGAATTA CTCGATATGC TGCTCGAACT CCCACCTGAA CACTGCGATT TTGGCGACGA TGTGTACTGC GAGCCCTGCG GCGATCCTAA CGATCCGGAT TGCAACGCTA GCATGCTGGC GGGGGTGCAA TACGATATCT TAGAAATGCA AACCCTCGAT CGCGTACTCG GGCCTGATGC CGAGCTATAT CAAGCGGTGA CAAACCGCAG ACGACTAAAA CGCGTCGATG ATTCGATTCA AATCAAGAGC TGTCACAGCC CGCTGCGCGA AGTCGAAACC TTACACGATC ATTTACTCGA CCTGCTGGAT CGTGACAACC AACTCACGCC CAAAGATATT GTGGTAATGA TGCCGGATGT CGCCGCCTAC GCGCCCTATA TTGATGCGGT GTTTGCCGCC AAACAAGGGC TCGAATATAT CCCCTACGCC ATTGCCGACC GCGGCGCGGC GCAGGAATCG CCACTCATTA ATAGCTTTTT GAATTTACTC AATATTAATC AGAGTCGCTT CGGACTGACC GATATTTTAA GCATTCTAGA AGTGCCAGCG ATTTTACGGC GTTTTCAACT CGAAGAAGAC GAGCTACCAC TGATCCGCCG TTGGTTAGAT GAAGCCGGTG TGCGTTGGGG GCGCGATGAG CAAAGCCGTG TTAAACAGGG TGTGCCCGCC TTTGAGCAAA ACTCCTGGGC CTTTGGTATC AAACGGTTAA TCTTGGGCTA TGCCTTAAGG AACGATGCAC CCTTGTATCA AGCAAGCCCA CAGGCGCCAA GCTATTTAGT GGTTTCAGGG GTAGAAGGCC AATCGGCACA GGCCCTTGGC AAACTGTTGA ACTTTATTGA AGTCCTCGAT GAAACCACGC TGCAATTAGC CCAGCCTCAA GCGCCTTGCC AGCGTTTATT TGAACTGACT CAACTGTTAA ATGCTTTTTA CGCCCCCGAT GAGGATGAGC GTGAGCAGTT ACAGGAAGTC CGCGACGCCA TTGCCACCTT AGAGCAAGAG TTACAGGCCG CCAGCCCTGC TGACAGCTAT ACAGCGGCAT ACGACGTTAA CCCCTATTTT TTAGACCAAA GCGGCTTACA CTCAAACGCC TTGAACTTAA GCATCGAAGT ACTCGCACAA TGGTTTAATC AGCGCTTAAC CGAGTCACGG GTTGGCCAGC GTTATCTAGC GGGCAGTGTA AATTTTTGTA CCTTAATGCC GATGCGCTCG ATTCCGTTTA AGGTGGTGTG CCTACTCGGC ATGAATGATG GCATATATCC GCGCATGCAA CATCCTGTGG GCTTTGATCT GATGGCACAT TTTGGTGCTC GCAAAGGCGA TCGCTCCCGC AGATTAGACG ATAGGTACTT GTTTTTAGAA GCACTACTCT CGGCACGGGA ACAGCTTTAC ATCAGCTATA TTGGCCGCAG TGAGCGGGAT AACTCGGAGC GCATTCCCTC GATGCTAGTC TCCGAGCTGA TTGAATATTG CCAGCTGTGT TATGTGCCAG AATCGCTTAC AGCAGAAACT CCAGCCGTGG GTAATGAAGC CGCCCAACAG GCCTTGCTTG AGACCATCAT AAGCCACCAG CCGCTACAAC CTTTTGATCC TAAACTGTAT CAGTCAACAG AGCCGCAAGC GCAGGCGATA AAACAAAGTT ACAGCCAGCA ATGGTGCCCA CCGGACATCA GCACGCAGTC AATCCAGCGT CGTTTTATTG ATGCCAACAC GCAGATCGTG CTCGAAGATG ACACGATTGG GGATAGTGAT ATTCAACAAA ATATTGAGCC ACTAAGTGAA GAAGAGCATG TCGATATCTC CGCTTTTATC CGATTCTTTC GTCATCCCGC GCAATATTTC TTTAATCGCA CATTAAAGGT TGATTTAAAC CTGAATATTC AAGCGGATGA TAATGATGAA CCCTTCAGCC TCAATGCGCT TGAGCGTTAT CTGTTACAGG CAAGGTTGCT CGATGATGCG CTCGAGCAAG GAGCTCTCGA ACAAGGCGCT CTTGAACAAG GACAGGCGCA GCCCAGTAGC GAACTATTAC AACGCTTAAA AGCCAGTGGT AATTTACCCA TGCAGCCCTT TGATGATCTG CTGCTGCGCC AATATAGCCA CGATATCGCA CCATTGATTG GCAGAACCTT ATTTATGCGC GGCGATGTAG CTCCGCGCCA TGCGGATATT CGGCTCGCCT TTGAGTTACC TCTATCTCAC GTTGCTGCAA CGACTAAGGT GTCGGTAAAG CGCGTGCTCC TTGAAGGTCG CATTGATGAT ATCAGTCCAA AAGGCTTGGT CAGTTGTCGC CCTGGCAGTG CCCATGGGCG GGATATTTTA GCGCTGTATC TGCGCCATTT ATGTTTAATG GCCGCAGGAC TGACTCAGCC TAGCGATCAG CAGCCCAGCT ATCTACAACC TAGCTATCTA CTCGATATGG GGCATTTTCA CGCCCTCTCG CCCATTGCGC CAAAGCAGGC CCATGATCGA CTGGTTCATT TGTTACAACA TTTTTATCAG GGACAGTTGC ATCCGCTGTG TTTTATGCCC AAAACCTCCC TTGCCTACGC CAGTGCAGAG ATCAATGAGG ATGAAACCAG TCAACTTGAT GGTCAATACG ATAGCCAACA CAGTGTGCGG CTCGAGGCGG CGCAAAGCGA ATGGCTGGAC GAACAAGGTG AACTTGGCGA AGGCACCGAT CCCCATTACC AGCGGCTGTT TCGGTTTCCG CAGGATTTTA CCGAAGCAAA TTTTGGCAAA CTGGCCGACG AGATCTATCG ACCCATGCTG AGCTTGTACC ATAAAGACAC CCTCGCCCAA CTTGAGGAGT TTGTGCTCAA TGCTGAACCA CAAACCGCAA CATCAGAGGG AGCGCAGCAA TGA
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Protein sequence | MLKLIQSNQM EVLCAHLAAY LRQPLPGGCL LQSEHILVQS PGMSTWLRLE IAKQNGIAAA LEFPLPSSFI WQLCHDLLPN VPKENAFTKA AMTWKLMQLL PRLLEEESFG PLRHYLGHIE SSSPDSTTKN NQLEASNSIA ADNIKLYQLC GRIADIFDQY LVYRPDWIAA WEANEPLDAL KLNEEQRWQP ILWRALIAFN RDELRQSHYH RANLHQDLIA ALADSTHSLA KLPERLFVFG ISSMAPQTID VLHQLAARID VIILNLSPCQ HYWGDIIDPR HRARMALQYA GKRQLAEQWE DKLEVGNPLL ANNGKMGREL LDMLLELPPE HCDFGDDVYC EPCGDPNDPD CNASMLAGVQ YDILEMQTLD RVLGPDAELY QAVTNRRRLK RVDDSIQIKS CHSPLREVET LHDHLLDLLD RDNQLTPKDI VVMMPDVAAY APYIDAVFAA KQGLEYIPYA IADRGAAQES PLINSFLNLL NINQSRFGLT DILSILEVPA ILRRFQLEED ELPLIRRWLD EAGVRWGRDE QSRVKQGVPA FEQNSWAFGI KRLILGYALR NDAPLYQASP QAPSYLVVSG VEGQSAQALG KLLNFIEVLD ETTLQLAQPQ APCQRLFELT QLLNAFYAPD EDEREQLQEV RDAIATLEQE LQAASPADSY TAAYDVNPYF LDQSGLHSNA LNLSIEVLAQ WFNQRLTESR VGQRYLAGSV NFCTLMPMRS IPFKVVCLLG MNDGIYPRMQ HPVGFDLMAH FGARKGDRSR RLDDRYLFLE ALLSAREQLY ISYIGRSERD NSERIPSMLV SELIEYCQLC YVPESLTAET PAVGNEAAQQ ALLETIISHQ PLQPFDPKLY QSTEPQAQAI KQSYSQQWCP PDISTQSIQR RFIDANTQIV LEDDTIGDSD IQQNIEPLSE EEHVDISAFI RFFRHPAQYF FNRTLKVDLN LNIQADDNDE PFSLNALERY LLQARLLDDA LEQGALEQGA LEQGQAQPSS ELLQRLKASG NLPMQPFDDL LLRQYSHDIA PLIGRTLFMR GDVAPRHADI RLAFELPLSH VAATTKVSVK RVLLEGRIDD ISPKGLVSCR PGSAHGRDIL ALYLRHLCLM AAGLTQPSDQ QPSYLQPSYL LDMGHFHALS PIAPKQAHDR LVHLLQHFYQ GQLHPLCFMP KTSLAYASAE INEDETSQLD GQYDSQHSVR LEAAQSEWLD EQGELGEGTD PHYQRLFRFP QDFTEANFGK LADEIYRPML SLYHKDTLAQ LEEFVLNAEP QTATSEGAQQ
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