Gene SO_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2149 
SymbolrecC 
ID1169890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2259476 
End bp2263288 
Gene Length3813 bp 
Protein Length1270 aa 
Translation table11 
GC content50% 
IMG OID637344011 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionNP_717750 
Protein GI24373707 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAGT TAATCCAATC CAACCAAATG GAAGTGCTCT GTGCCCATCT CGCTGCGTAT 
TTGCGCCAAC CGTTGCCCGG TGGCTGTTTA TTGCAAAGCG AGCATATTTT GGTGCAAAGC
CCTGGGATGT CGACTTGGTT ACGCCTTGAG ATTGCAAAAC AAAATGGCAT TGCCGCCGCG
CTTGAGTTCC CTTTGCCATC CAGTTTCATT TGGCAACTGT GTCACGATTT ACTGCCCAAT
GTCCCCAAGG AAAACGCCTT TACTAAAGCG GCAATGACCT GGAAATTAAT GCAACTACTG
CCTCGCCTAC TTGAGGAGGA ATCCTTTGGG CCGCTGCGGC ATTATTTAGG TCATATTGAG
TCAAGCAGCC CCGACTCGAC CACAAAAAAT AATCAACTTG AAGCGTCAAA CTCAATCGCC
GCCGATAATA TTAAGCTTTA TCAGCTCTGC GGTCGCATCG CCGATATCTT CGACCAATAT
TTAGTTTACC GCCCCGACTG GATTGCCGCA TGGGAAGCCA ATGAACCACT CGATGCACTC
AAATTAAATG AGGAACAACG CTGGCAACCT ATTCTTTGGC GGGCGCTGAT TGCCTTCAAC
CGTGACGAAC TGCGTCAAAG CCATTACCAC AGGGCCAATT TACATCAGGA TTTAATTGCC
GCGCTGGCTG ATAGCACCCA TTCCCTCGCC AAATTGCCTG AGCGTTTATT TGTGTTTGGC
ATTTCGTCTA TGGCCCCACA AACCATAGAC GTGCTCCACC AGCTCGCGGC CCGAATTGAT
GTCATCATCC TTAACCTCAG CCCATGCCAG CATTATTGGG GCGATATTAT CGATCCTCGG
CATCGAGCGC GAATGGCGCT GCAATATGCT GGCAAACGCC AATTGGCCGA GCAATGGGAA
GATAAACTCG AGGTCGGCAA TCCGCTGCTT GCCAACAATG GCAAAATGGG CCGTGAATTA
CTCGATATGC TGCTCGAACT CCCACCTGAA CACTGCGATT TTGGCGACGA TGTGTACTGC
GAGCCCTGCG GCGATCCTAA CGATCCGGAT TGCAACGCTA GCATGCTGGC GGGGGTGCAA
TACGATATCT TAGAAATGCA AACCCTCGAT CGCGTACTCG GGCCTGATGC CGAGCTATAT
CAAGCGGTGA CAAACCGCAG ACGACTAAAA CGCGTCGATG ATTCGATTCA AATCAAGAGC
TGTCACAGCC CGCTGCGCGA AGTCGAAACC TTACACGATC ATTTACTCGA CCTGCTGGAT
CGTGACAACC AACTCACGCC CAAAGATATT GTGGTAATGA TGCCGGATGT CGCCGCCTAC
GCGCCCTATA TTGATGCGGT GTTTGCCGCC AAACAAGGGC TCGAATATAT CCCCTACGCC
ATTGCCGACC GCGGCGCGGC GCAGGAATCG CCACTCATTA ATAGCTTTTT GAATTTACTC
AATATTAATC AGAGTCGCTT CGGACTGACC GATATTTTAA GCATTCTAGA AGTGCCAGCG
ATTTTACGGC GTTTTCAACT CGAAGAAGAC GAGCTACCAC TGATCCGCCG TTGGTTAGAT
GAAGCCGGTG TGCGTTGGGG GCGCGATGAG CAAAGCCGTG TTAAACAGGG TGTGCCCGCC
TTTGAGCAAA ACTCCTGGGC CTTTGGTATC AAACGGTTAA TCTTGGGCTA TGCCTTAAGG
AACGATGCAC CCTTGTATCA AGCAAGCCCA CAGGCGCCAA GCTATTTAGT GGTTTCAGGG
GTAGAAGGCC AATCGGCACA GGCCCTTGGC AAACTGTTGA ACTTTATTGA AGTCCTCGAT
GAAACCACGC TGCAATTAGC CCAGCCTCAA GCGCCTTGCC AGCGTTTATT TGAACTGACT
CAACTGTTAA ATGCTTTTTA CGCCCCCGAT GAGGATGAGC GTGAGCAGTT ACAGGAAGTC
CGCGACGCCA TTGCCACCTT AGAGCAAGAG TTACAGGCCG CCAGCCCTGC TGACAGCTAT
ACAGCGGCAT ACGACGTTAA CCCCTATTTT TTAGACCAAA GCGGCTTACA CTCAAACGCC
TTGAACTTAA GCATCGAAGT ACTCGCACAA TGGTTTAATC AGCGCTTAAC CGAGTCACGG
GTTGGCCAGC GTTATCTAGC GGGCAGTGTA AATTTTTGTA CCTTAATGCC GATGCGCTCG
ATTCCGTTTA AGGTGGTGTG CCTACTCGGC ATGAATGATG GCATATATCC GCGCATGCAA
CATCCTGTGG GCTTTGATCT GATGGCACAT TTTGGTGCTC GCAAAGGCGA TCGCTCCCGC
AGATTAGACG ATAGGTACTT GTTTTTAGAA GCACTACTCT CGGCACGGGA ACAGCTTTAC
ATCAGCTATA TTGGCCGCAG TGAGCGGGAT AACTCGGAGC GCATTCCCTC GATGCTAGTC
TCCGAGCTGA TTGAATATTG CCAGCTGTGT TATGTGCCAG AATCGCTTAC AGCAGAAACT
CCAGCCGTGG GTAATGAAGC CGCCCAACAG GCCTTGCTTG AGACCATCAT AAGCCACCAG
CCGCTACAAC CTTTTGATCC TAAACTGTAT CAGTCAACAG AGCCGCAAGC GCAGGCGATA
AAACAAAGTT ACAGCCAGCA ATGGTGCCCA CCGGACATCA GCACGCAGTC AATCCAGCGT
CGTTTTATTG ATGCCAACAC GCAGATCGTG CTCGAAGATG ACACGATTGG GGATAGTGAT
ATTCAACAAA ATATTGAGCC ACTAAGTGAA GAAGAGCATG TCGATATCTC CGCTTTTATC
CGATTCTTTC GTCATCCCGC GCAATATTTC TTTAATCGCA CATTAAAGGT TGATTTAAAC
CTGAATATTC AAGCGGATGA TAATGATGAA CCCTTCAGCC TCAATGCGCT TGAGCGTTAT
CTGTTACAGG CAAGGTTGCT CGATGATGCG CTCGAGCAAG GAGCTCTCGA ACAAGGCGCT
CTTGAACAAG GACAGGCGCA GCCCAGTAGC GAACTATTAC AACGCTTAAA AGCCAGTGGT
AATTTACCCA TGCAGCCCTT TGATGATCTG CTGCTGCGCC AATATAGCCA CGATATCGCA
CCATTGATTG GCAGAACCTT ATTTATGCGC GGCGATGTAG CTCCGCGCCA TGCGGATATT
CGGCTCGCCT TTGAGTTACC TCTATCTCAC GTTGCTGCAA CGACTAAGGT GTCGGTAAAG
CGCGTGCTCC TTGAAGGTCG CATTGATGAT ATCAGTCCAA AAGGCTTGGT CAGTTGTCGC
CCTGGCAGTG CCCATGGGCG GGATATTTTA GCGCTGTATC TGCGCCATTT ATGTTTAATG
GCCGCAGGAC TGACTCAGCC TAGCGATCAG CAGCCCAGCT ATCTACAACC TAGCTATCTA
CTCGATATGG GGCATTTTCA CGCCCTCTCG CCCATTGCGC CAAAGCAGGC CCATGATCGA
CTGGTTCATT TGTTACAACA TTTTTATCAG GGACAGTTGC ATCCGCTGTG TTTTATGCCC
AAAACCTCCC TTGCCTACGC CAGTGCAGAG ATCAATGAGG ATGAAACCAG TCAACTTGAT
GGTCAATACG ATAGCCAACA CAGTGTGCGG CTCGAGGCGG CGCAAAGCGA ATGGCTGGAC
GAACAAGGTG AACTTGGCGA AGGCACCGAT CCCCATTACC AGCGGCTGTT TCGGTTTCCG
CAGGATTTTA CCGAAGCAAA TTTTGGCAAA CTGGCCGACG AGATCTATCG ACCCATGCTG
AGCTTGTACC ATAAAGACAC CCTCGCCCAA CTTGAGGAGT TTGTGCTCAA TGCTGAACCA
CAAACCGCAA CATCAGAGGG AGCGCAGCAA TGA
 
Protein sequence
MLKLIQSNQM EVLCAHLAAY LRQPLPGGCL LQSEHILVQS PGMSTWLRLE IAKQNGIAAA 
LEFPLPSSFI WQLCHDLLPN VPKENAFTKA AMTWKLMQLL PRLLEEESFG PLRHYLGHIE
SSSPDSTTKN NQLEASNSIA ADNIKLYQLC GRIADIFDQY LVYRPDWIAA WEANEPLDAL
KLNEEQRWQP ILWRALIAFN RDELRQSHYH RANLHQDLIA ALADSTHSLA KLPERLFVFG
ISSMAPQTID VLHQLAARID VIILNLSPCQ HYWGDIIDPR HRARMALQYA GKRQLAEQWE
DKLEVGNPLL ANNGKMGREL LDMLLELPPE HCDFGDDVYC EPCGDPNDPD CNASMLAGVQ
YDILEMQTLD RVLGPDAELY QAVTNRRRLK RVDDSIQIKS CHSPLREVET LHDHLLDLLD
RDNQLTPKDI VVMMPDVAAY APYIDAVFAA KQGLEYIPYA IADRGAAQES PLINSFLNLL
NINQSRFGLT DILSILEVPA ILRRFQLEED ELPLIRRWLD EAGVRWGRDE QSRVKQGVPA
FEQNSWAFGI KRLILGYALR NDAPLYQASP QAPSYLVVSG VEGQSAQALG KLLNFIEVLD
ETTLQLAQPQ APCQRLFELT QLLNAFYAPD EDEREQLQEV RDAIATLEQE LQAASPADSY
TAAYDVNPYF LDQSGLHSNA LNLSIEVLAQ WFNQRLTESR VGQRYLAGSV NFCTLMPMRS
IPFKVVCLLG MNDGIYPRMQ HPVGFDLMAH FGARKGDRSR RLDDRYLFLE ALLSAREQLY
ISYIGRSERD NSERIPSMLV SELIEYCQLC YVPESLTAET PAVGNEAAQQ ALLETIISHQ
PLQPFDPKLY QSTEPQAQAI KQSYSQQWCP PDISTQSIQR RFIDANTQIV LEDDTIGDSD
IQQNIEPLSE EEHVDISAFI RFFRHPAQYF FNRTLKVDLN LNIQADDNDE PFSLNALERY
LLQARLLDDA LEQGALEQGA LEQGQAQPSS ELLQRLKASG NLPMQPFDDL LLRQYSHDIA
PLIGRTLFMR GDVAPRHADI RLAFELPLSH VAATTKVSVK RVLLEGRIDD ISPKGLVSCR
PGSAHGRDIL ALYLRHLCLM AAGLTQPSDQ QPSYLQPSYL LDMGHFHALS PIAPKQAHDR
LVHLLQHFYQ GQLHPLCFMP KTSLAYASAE INEDETSQLD GQYDSQHSVR LEAAQSEWLD
EQGELGEGTD PHYQRLFRFP QDFTEANFGK LADEIYRPML SLYHKDTLAQ LEEFVLNAEP
QTATSEGAQQ