| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2147 |
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| Symbol | recD |
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| ID | 1169888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2253511 |
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| End bp | 2255649 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637344009 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | NP_717748 |
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| Protein GI | 24373705 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACG CCACTGCCCT TGCCGCCAAT TGGTACAATG CAGGCGCGCT GAGACTTAAA
GCACCACTGA CTGAGTTGCT CAAATATTGG GAGAAAGAGC GGCTTATCAC CGCTCTCGAT
CGCCATTTTG CCCTCGAGAT GGCCCGTCTT CACCCCAATG ACGCCCAAGA GCCACTGTTT
ATGCTGCTGT GCGCCCTGTT GAGTCAGCAA CTGTCGGCCC AACATACTTG TCTAGTGCTC
GAATATATAG TGCCAACCAA TCCGATGGCA GAGCCGATAA ACCGCTGTCA AATCCGTTTA
AGCCTTACTG AACTGATTGA CGCACTGCAA CACTTTGACG CCATTGGAGC ACCAAATAGC
AATAAACCAC TGATTTTTGA GGATGGTAGA CTCTATCTTG AGCGTTATCA TCATTTTGAA
ACCCAAGTTG CCAGCGCCTT AACAAGGTTA TCAGCGGCGG CGCTTTCGTT AACGCCATCG
CAGCCTTTAG CATCGGATAA TCAATCACTT TTACAGCTAC GCAGGCAACT GGATTGCTTA
TTTCCAAGCG CAGCCCACAC CGTTGAAGCG AACATCGATT GGCAAAAGGT CGCCACTGCA
ACGGCGCTCG GTAACAAGCT GGCGGTGATA ACGGGTGGCC CCGGTACAGG TAAAACCACT
ACGGTGACTA AATTGCTGTT GTTACAACAA TTAGGTACAC CAAAGCAAAT AAGACTTGTC
GCCCCGACGG GCAAAGCGGC CGCCCGTTTA AGTGAATCCA TTAAGGCTTC TAAAGCGAGG
CTCGAGCAAG AGCTTCAACA AGCGAGCAAG GAAAACCCTC AAGAAAACCA AGTGTTATTA
ACCGCACTGA GTCGTATCCC CGAGGAGGCA TCAACCTTAC ATCGCCTGCT GGGTGTCATT
CCCAATTCAG CGCATTTTCG CCATCATCAA GGTAACCCAT TACGGCTCGA TCTTTTGATT
GTGGATGAAG CCTCCATGGT CGATTTGCCT ATGATGTACA AGCTGCTCAG CGCATTGCCG
GAACACGCAG GCTTGATATT GCTTGGGGAT CAGGATCAAC TCGCTTCAGT TGAGGCAGGC
GCCGTACTTG CCGATATTTG CGCCGGACTT AAGCAAGCCT CGACTCAACA TACCGAGTGG
AAAATGCGTT ATAGCCAAGC ACAGGCCGAG CAATTAACCG CGCTCACGGG CTTTAATTTA
AGCCACTTTA TCCACAGTGA GCCTAAAATT GGCGATAGCC TGTGTATGCT AACCCACAGC
CATCGATTTA AAGGCGATGC CGGGATTGGC TTGCTGGCCA GCGCAGTCAA CCGCGCCGAT
CTCGCAGGTA TTTTATCCGT TTGGCAAAGC GGGCTTGCTG AATTAACCTG GTTAGAACAC
AGCGTAGATC ACAGCCAAAC CCAAGCAAAA ATCAGTGAAC CTAGCAACAA TACCGGACTT
AAAGCGCTAC TTGCACAGGC CTGTGAGCAA TACGGTGACT ATTTACGCCT GTTACAGCCA
ACGCACGCCA CTCCAATACA TACGAGTGAG CCATTTTGCC CGCCAAGCGC CATGGAGGCG
ATTGCCAAAT TTAATCAATA TCGCATTTTG TGCGCCATGC GAACCGGCGA TTATGGTGTC
GAAGGGATTA ATCTTGCGGT GACTAAGGCA TTAGCGCAGG CCAAACTTAT TCAGCCTCAG
CAGGAGTTTT ACCTCGGGCG CCCCATTATC ATCCAAAGTA ACGACTATAA CTTAGGCCTG
TTTAACGGCG ATATTGGCTT GATTTTGCAG GATGAAGAGA GAGCTGACCG CCTGATGGCC
CACTTTATTA AAGCTGATGG CAAACTGCTT AAAGTGTTAC CCGCAAGGCT ACCTAGCCAC
GAAACCTGTT ACGCCATGAC GGTGCATAAA AGCCAAGGCA GTGAATTTAA TCGAGTCGCC
TTAGTGCTCC CGCCTGCACC GAGCCTAGTT CAGTGGCAAT TATTAACAAA AGAGCTGATC
TACACCGCAA TTACCCGTGC AAAACAACAC TTTAGTTGCC TAGGCACTCA GCAGGTTTTT
GAACGCGCAA GCCTGCAAGC TACCCAACGC GCCTCGGGAT TAGCCGACAG GCTGTGGGGC
GATCAATCGC TGAGCCATAC AGCAGCAGTC AATAGCTAA
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| Protein sequence | MNNATALAAN WYNAGALRLK APLTELLKYW EKERLITALD RHFALEMARL HPNDAQEPLF
MLLCALLSQQ LSAQHTCLVL EYIVPTNPMA EPINRCQIRL SLTELIDALQ HFDAIGAPNS
NKPLIFEDGR LYLERYHHFE TQVASALTRL SAAALSLTPS QPLASDNQSL LQLRRQLDCL
FPSAAHTVEA NIDWQKVATA TALGNKLAVI TGGPGTGKTT TVTKLLLLQQ LGTPKQIRLV
APTGKAAARL SESIKASKAR LEQELQQASK ENPQENQVLL TALSRIPEEA STLHRLLGVI
PNSAHFRHHQ GNPLRLDLLI VDEASMVDLP MMYKLLSALP EHAGLILLGD QDQLASVEAG
AVLADICAGL KQASTQHTEW KMRYSQAQAE QLTALTGFNL SHFIHSEPKI GDSLCMLTHS
HRFKGDAGIG LLASAVNRAD LAGILSVWQS GLAELTWLEH SVDHSQTQAK ISEPSNNTGL
KALLAQACEQ YGDYLRLLQP THATPIHTSE PFCPPSAMEA IAKFNQYRIL CAMRTGDYGV
EGINLAVTKA LAQAKLIQPQ QEFYLGRPII IQSNDYNLGL FNGDIGLILQ DEERADRLMA
HFIKADGKLL KVLPARLPSH ETCYAMTVHK SQGSEFNRVA LVLPPAPSLV QWQLLTKELI
YTAITRAKQH FSCLGTQQVF ERASLQATQR ASGLADRLWG DQSLSHTAAV NS
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