Gene SO_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2129 
Symbol 
ID1169872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2235731 
End bp2236852 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content45% 
IMG OID637343995 
Producttransposase, putative 
Protein accessionNP_717732 
Protein GI24373689 
COG category[L] Replication, recombination and repair 
COG ID[COG5433] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTTG AAGCCTTCAC GTCTCATTTC AACTCGATTG CTGACAGCCG ACAATCTGCC 
AAAGTGACTT ACCCATTGCA TGATGTATTG TTCGTCACTC TGTGTGGTGT GATTGCTGGG 
GCCGAAGGCT GGTCAGAAAT CCATGACTAT GCTGCCGGAC ATCATACCTG GTTTAAAGAA 
AAGGGAATTC TGACCGAAGG TGTCCCTGTC GATGACACCA TTGCACGTAT TATCTCTCGT 
ATCGAACCGG AACAGTTTCG ACTGTGCTTC GCCAATTGGA TGCGAGCCGT CCATGAGATG 
AGTGATGGTC ATCTTATTGC TATCGATGGT AAAACGCTTC GTGCCTCATA CAATCGTGAA 
GATCGGCGCT CAACCATTCA TATGGTCAAT GCGTTTGCCT GTGCCAATAA AGTGGTGCTG 
GGACAAGTAA AAACTGCAAA TAAATCCAAT GAGATAACTG CAATCCCAGC GCTGCTCCAG 
TTGTTAGATA TAGAAGGAGC ACTGGTATCA ATCGACGCCA TGGGTTGCCA GACAGAGATT 
GCAAGGCAGA TAGTCGAGCA AGGAGGTGAC TACTTACTTG CTGTGAAGGT GAATCAAAGT 
TCCTTGCATG AGGCCGTGGT CAGTGCTTTC AGTGAAGCGC GCAGTAATCC TCTTGATGGA 
CTCGTTATTG AGAAAAATAG AGGTCGTATC GAGGCAAGAG CCTACTATGT AATACCTGCA 
AACCAGCTCC AAGATAATTT TCCTAAGTGG ATGAAATTGA ACACATTAGG TATGTGTTTG 
AGTTATCGGC ATACGAAAGG GAAAGAGGCA GAACTGACCT ACCGTTACTA TATCAGTTCA 
GCCACACTCG ATGAGCAGCT GTTAGCCAAT TCAGTTCGTG GGCATTGGGG TATTGAGAAC 
AGCTTACACT GGGTGCTAGA TGTCTCAATG AAAGAAGATA GTTGCCAGAT TTACCAACAT 
CATGGGGCAG AAAATTGGGC CATGCTTAGG CACATATCAC TGAATATGCT TAGGGCTGAA 
CCTTCTAAAG GAAGCATTCC AGCGAAACAG AAAAGAGCTT GGATGAAACC TGAATATTTA 
GAATCGGTTC TATTAGCAGG GTTGCAGCTG GACGAATTTT AA
 
Protein sequence
MYLEAFTSHF NSIADSRQSA KVTYPLHDVL FVTLCGVIAG AEGWSEIHDY AAGHHTWFKE 
KGILTEGVPV DDTIARIISR IEPEQFRLCF ANWMRAVHEM SDGHLIAIDG KTLRASYNRE 
DRRSTIHMVN AFACANKVVL GQVKTANKSN EITAIPALLQ LLDIEGALVS IDAMGCQTEI 
ARQIVEQGGD YLLAVKVNQS SLHEAVVSAF SEARSNPLDG LVIEKNRGRI EARAYYVIPA 
NQLQDNFPKW MKLNTLGMCL SYRHTKGKEA ELTYRYYISS ATLDEQLLAN SVRGHWGIEN 
SLHWVLDVSM KEDSCQIYQH HGAENWAMLR HISLNMLRAE PSKGSIPAKQ KRAWMKPEYL 
ESVLLAGLQL DEF