Gene SO_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2109 
Symbol 
ID1169852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2208142 
End bp2209650 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content45% 
IMG OID637343974 
Producthypothetical protein 
Protein accessionNP_717712 
Protein GI24373669 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCCTG TAACTCGATT AACACTATCC TACACCTTAG GACCTTGCCG GAAAATGTCG 
CAAAGACTGT GGTGGTTAAC AGCATTACTG ATGGCATTTA CATTGGTTTC TATCGAACTG
CAAGCGGTGG AGCCAACTGA GCGACCTAAT CTTTCTTCTG AACCAGACAT TTCGATTGAA
GAACTCCTCG CTCACACATT GTTGCTTGAT CTTGCCGACG TTAGCCCCGT ATTTAGCACT
AATTATCTAA AACTCAGGCA ATGGCAACAG AGGCGCTTAA ATCCCGATGA GCAAGCCGAA
CTTATAAAAA TGCGCCAACA ACTTGTGCGC TATTGGCATT ACCTCGATCA ACAAGCGGAA
TGTGTTGAAC CTTGTATTAG TAAGATATTT ACTCAGCAAT CTAGCTATTA CCATGCCGTG
AGCTTGACGC TGTATCAACT GATGCAGTTA GAAGATTTGA CTTCATGGGA GTTGTTAACA
CTAGAGGAGA AACTCAGTCC AGGGCAGCAA AGCCCATTGA TCTCGCCCAT CGCTCGGCGG
CTATTGATAT TGGGATTTCT GCCAAATGAA CTCCGCATGG AACCATCGGT AGGGGTAGAG
GCGAATAATG GGATGCTTTA TGGCGATGAG CTAGTCACTG CCATTAAGCT ATTCCAGCAG
CAACACGGCT TACTTGCCGA TGGTGTGATA GGTAAGCAAA CCCTTTTCTG GCTTAACCAA
TCCCCGCGAG CCAGAGCTAA GTTGCTGGCG AGAAATGTGC TTAGACAGTC GATTTTTACA
GCTCAGTTAC CCGCACGTTA TCTACTCGTC AATATTCCAG CATTTGAGCT CAAACTAATT
GAAGATGGGC AGGTGGCTTT ACGCTCTAAG GTTATTGTCG GTAAAGCATC GCGTCCAACG
CCCTTGTTAG CAAGCCAAAT TTCCAGTGTT GTAATGAACC CTGAGTGGAG AGTGCCACGC
ACGATTATCA AACGTGATAT TTTGCCGCAT ATTCGCCAAG ATGGACATTA TCTCACGGAA
CGTGAATTTG ATGTTTATGC TTATGACGGT CAACAAGCCG AGCACTCTGC AGATGAATGG
CAAGCACTAG CCTCATCACA TTTTCCTTAT CAGTTGGTGC AACGGCCTGG TCCCAAAAAT
GCTTTAGGCC GCTATAAATT TCATTTCGAC AATAGTTTTA GTGTGTATTT GCACGGAACT
TCTGAGCCAA GTCTCTTTAA AAGAACTAAC AGAGCGTTAT CATCGGGCTG TATTCGGGTA
GAGAAGGTTG AGGAATTAGC CCTTTGGTTT AAGACCCATT TAGTCAAAGA TCAACGCCTT
TGGGATAAAT TGCATACTGA TACCACTCAA TCGCAATGGT TTGCTTTGTC CGATAAATTG
CCTGTATTTG TGGTTTATTG GACTGTGTGG CTCGATGATG CGGGGCAAGT GCAATATCGC
AATGATATTT ATCAGCAAGA GAGTGAGCTG AGTCATGCGG TTTCTGCAAC GATTTTTAAC
ACTCTCTAA
 
Protein sequence
MVPVTRLTLS YTLGPCRKMS QRLWWLTALL MAFTLVSIEL QAVEPTERPN LSSEPDISIE 
ELLAHTLLLD LADVSPVFST NYLKLRQWQQ RRLNPDEQAE LIKMRQQLVR YWHYLDQQAE
CVEPCISKIF TQQSSYYHAV SLTLYQLMQL EDLTSWELLT LEEKLSPGQQ SPLISPIARR
LLILGFLPNE LRMEPSVGVE ANNGMLYGDE LVTAIKLFQQ QHGLLADGVI GKQTLFWLNQ
SPRARAKLLA RNVLRQSIFT AQLPARYLLV NIPAFELKLI EDGQVALRSK VIVGKASRPT
PLLASQISSV VMNPEWRVPR TIIKRDILPH IRQDGHYLTE REFDVYAYDG QQAEHSADEW
QALASSHFPY QLVQRPGPKN ALGRYKFHFD NSFSVYLHGT SEPSLFKRTN RALSSGCIRV
EKVEELALWF KTHLVKDQRL WDKLHTDTTQ SQWFALSDKL PVFVVYWTVW LDDAGQVQYR
NDIYQQESEL SHAVSATIFN TL