| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2108 |
|---|
| Symbol | mdoH |
|---|
| ID | 1169851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 2205808 |
|---|
| End bp | 2207991 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637343973 |
|---|
| Product | glucosyltransferase MdoH |
|---|
| Protein accession | NP_717711 |
|---|
| Protein GI | 24373668 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2943] Membrane glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTAT CCGAGAGTTC GGTACTTGAT ACTGAAGTGC TCGTGGGTGG TAGTGCCATG
CCTAATGAAA GGCCTGGCCC TATGGAGCCC CAAAGTTTAA GCCAAATGCC AGAAGGATTC
CCAAGGCGCA GCACTGTGGC AAACGGTGTT CGTTCACGGG CCTCCCGGCG GTTTTTTGTG
GTCGGTGGCG CTTTGTTGCT ATCATCCTTT GCTATCTATG AGATGGGCGC TGTATTCAGT
ATTGGTGGTA TTACCCCACT CGAATATCTG ATGTTGGCGT TGTTTGCGAT TAACTTCTGC
TGGATTGCAC TCGCGTTTTG TAGTGGGATA GCTGGTTTTT TACTTCTGCT GAAAAAGCCT
AAGCCAAACG AGCTTGCGCA AACGGAGTTG CATACTCGCA CCGCAATTTT AATGCCGACC
TATAATGAAT CCCCCGACAG GGTGTTTTCG GCGGTTTCAG TTATGGCTGA GGCATTATCG
CAAACGGGCC ATGGACATGC GTTTGATTGG TTTATCTTAA GCGATACTAC AGATCCCGAA
ATCGCTCTGT TAGAAGAGCA GGCATTTTTG GTTCTTCGCC AAGAAACCCA TAAACATTCG
CGTGTTTATT ATCGTCGCCG TCGTAAAAAC GTCGCACGAA AAGCAGGGAA CGTGGCTGAC
TTTTGCCGAC GTTGGGGCTC GCGTTATGAT CACCTATTAG TACTCGATGC CGACAGTTTG
ATGGAGTCAT CAACCATCAC TGGCTTAGCG CAGCGGATGC AAGCCGATCC TGATGCTGGA
CTGATTCAAA CTATTCCATC ACTCATCAAT GGCACTACCT TAATGGCACG TTTGCAGCAG
TTTGCAGCGC GTATTTATGG GCCAGTGATT GGGACTGGAC TGGGTTGGTG GGTACAAAAA
GAAGGTAACT TCTGGGGGCA TAATGCCATT ATCCGCACCG AAGCCTTTAT GGGCGCGGCA
GGATTGCCCA ACCTTAAGGG GAAACCACCT TTTGGTGGGC ACATTCTAAG CCATGACTTT
GTCGAAGCAG CCCTTATCCG CCGTGCGGGT TGGAGTGTGG TCATTGCATA CGACTTACCC
GGCTCTTATG AGGAATGCCC TCCATCGATT GTCGACTTAG CTGTTCGCGA TCGCCGTTGG
TGTCAGGGTA ACTTACAGCA TTCACGCATT CTGCCCACCA AAGGGTTGCA TTGGGTGAGC
CGTTTGCACT TAATGACCGG GATTATGGCG TATTTGTCTT CGCCATTTTG GTTGTTATTG
ATTTTAACGG GTTTAATGCT CGCCCTGCAG GCACACTTTA TCCGCCCTGA GTACTTTACT
GATCAATTCT CGTTATTCCC GACTTGGCCA ATCATGGACT CCGATAGGGC ATTAAGATTG
TTCTATATCA CCATGGTGGT GCTGTTTGGT CCGAAGATCT TTGGGGTGTT ATTGCTATTA
AAAGATGGCA AATTTGCCCG CAGTGTGGGG GGACGCATTA AAGCCATGTT CAGTGTGCTG
TTTGAGGTGA TCCTTTCTGC GCTGATTGCG CCAATCATGA TGTTTATCCA CTGTGGTGCG
GTGATGTCTA TCCTGATGGG GCGTGACAGT GGTTGGTCAC CGCAGCGCCG TGATGATGGC
AGTATGCCTT GGTTAACCCT GATTTATCGG CATCGCTGGC ATATGCTTGC TGGCGTGATG
TTAGGTTATG CGGCGATTTT GGATTCATTA ACCTTACTTG CGTGGATGAG TCCTGCGTTG
ATTGGTTTGT GGTTAGCAGT GCCCATTTCG GCTTGGACAG GTTCAATTAA GATTGGTGAA
TTTTTCAAGC GTATCGGGAT CCTCGCCACA CCAGAAGAAC GCAATCCTGC GCCTATTTGT
ATTCGGGCAC AAGAAGCGCG TGCAGCTTAC CAGTCGCATA TTGAGCAGCC TTGGACATTA
GCGCAATTGC TGAAGGACCC TGCGTTGATG GAGCTGCATT TAGCGATGGT TGATAAACAG
CCACTACGGG CTGCAGGTAC ACCGATTGAA CCAGTTGAAG CCATTGTGCA TGTTAAAGTG
CACGAGGCAC AGTGTCAGCA AAGCGCTTTG GCTCTCTTTA ATCGTCAAGA AATGGCGCTG
GTGTTAGCTA ATCCACTTAT GTTGCGGAGT TTGCAAAAAC TACCTGAGCA GTTTGTGCCA
GAAGATCTTG TCTCCTTCTG CTAA
|
|---|
| Protein sequence | MTVSESSVLD TEVLVGGSAM PNERPGPMEP QSLSQMPEGF PRRSTVANGV RSRASRRFFV
VGGALLLSSF AIYEMGAVFS IGGITPLEYL MLALFAINFC WIALAFCSGI AGFLLLLKKP
KPNELAQTEL HTRTAILMPT YNESPDRVFS AVSVMAEALS QTGHGHAFDW FILSDTTDPE
IALLEEQAFL VLRQETHKHS RVYYRRRRKN VARKAGNVAD FCRRWGSRYD HLLVLDADSL
MESSTITGLA QRMQADPDAG LIQTIPSLIN GTTLMARLQQ FAARIYGPVI GTGLGWWVQK
EGNFWGHNAI IRTEAFMGAA GLPNLKGKPP FGGHILSHDF VEAALIRRAG WSVVIAYDLP
GSYEECPPSI VDLAVRDRRW CQGNLQHSRI LPTKGLHWVS RLHLMTGIMA YLSSPFWLLL
ILTGLMLALQ AHFIRPEYFT DQFSLFPTWP IMDSDRALRL FYITMVVLFG PKIFGVLLLL
KDGKFARSVG GRIKAMFSVL FEVILSALIA PIMMFIHCGA VMSILMGRDS GWSPQRRDDG
SMPWLTLIYR HRWHMLAGVM LGYAAILDSL TLLAWMSPAL IGLWLAVPIS AWTGSIKIGE
FFKRIGILAT PEERNPAPIC IRAQEARAAY QSHIEQPWTL AQLLKDPALM ELHLAMVDKQ
PLRAAGTPIE PVEAIVHVKV HEAQCQQSAL ALFNRQEMAL VLANPLMLRS LQKLPEQFVP
EDLVSFC
|
|---|
| |