| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2099 |
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| Symbol | hoxK |
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| ID | 1169843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2196869 |
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| End bp | 2198005 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637343965 |
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| Product | quinone-reactive Ni/Fe hydrogenase, small subunit precursor |
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| Protein accession | NP_717702 |
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| Protein GI | 24373659 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACACAC ATGCAGCCCT CTATGAACAG GGAAAGGCGC GCTTAGATGC ACTGCGCCAA
TTCGCTCCCC GTCAACAGCA AACATTACTC GAAAAATTAC AGCAACACGG CATCTCACGC
CGTGATTTTA TGAAATGGAG TGCCATGGTG ACGGGGATGC TCGCCCTACC ACTCCCCTTT
AGTAACTTAG TTGCTGAAGC GGCCGAACTC GCCGACCGTG TACCCTTAAT TTGGTTACAT
ATGGCTGAAT GTACTGGCTG CTCCGAATCC TTAGTTCGTG CCGATACCCC CAACTTAGAT
TCGCTGATCT TTGATCATAT CTCTTTGGAA TATCACGAAA CCTTAATGGC TGCTGCCGGT
TGGCAAGCTG AGGAAAACCT AGAGCACGCA CTCGAAACCT ACAAGGGGCG CTATTTACTG
GCCGTTGAAG GAGCAATCCC AACCGCCAAT AACGGCAGTT TCTTAACCGT AGGTTGTAAA
GGCCACACAG GTCTAGAAAT CGTCAAACAT GCAGCTGAAG GCGCCGCTGC GATTATCTCT
GTTGGCACTT GTGCAGCATT TGGTGGCGTG CAAGCCGCGT ACCCTAACCC TACGGGGGCT
AAGGGCGTGC ACGAAGTGGT CAGCAAACCC GTGATTAACT TAGGTGGTTG CCCACCGAGC
GAAAAGAACA TCGTCGGCAC CCTGATGTAT TTCATCATGT TCGGTAAATT GCCCGCACTC
GATATGTTCA ACCGTCCAAA ATGGGCCTAT GGCGCACGGG TACATGATAA CTGTGAACGT
CGTGGCCGTT TTGATGCAGG TGAGTTCGTT GAAGAATTTG GCGATCACGG CGCGAAAGAA
GGCTACTGCC TCTATAAAGT CGGTTGTAAA GGTCCCTACA CCTATAATAA CTGCCCAACG
GAACGCTTCA ACCACCACAC CAGCTGGCCA GTGTTAGCGG GCCACGGCTG TATGGGCTGC
TCTGAACCTA ACTTCTGGGA CGATATGGCT GACTTTGAAA AACCCCTTGG CCGTCAACTG
CTCCATGGAT TGGATGCAAC CGCAGACACC GTCGGTGCGG TGATTTTAGG CGCGACAGTC
GTTGGCATTG GCGCCCACGC CGTTGCCAGT ATTTTTGCCA AGCCGCTGGA GGAATAA
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| Protein sequence | MDTHAALYEQ GKARLDALRQ FAPRQQQTLL EKLQQHGISR RDFMKWSAMV TGMLALPLPF
SNLVAEAAEL ADRVPLIWLH MAECTGCSES LVRADTPNLD SLIFDHISLE YHETLMAAAG
WQAEENLEHA LETYKGRYLL AVEGAIPTAN NGSFLTVGCK GHTGLEIVKH AAEGAAAIIS
VGTCAAFGGV QAAYPNPTGA KGVHEVVSKP VINLGGCPPS EKNIVGTLMY FIMFGKLPAL
DMFNRPKWAY GARVHDNCER RGRFDAGEFV EEFGDHGAKE GYCLYKVGCK GPYTYNNCPT
ERFNHHTSWP VLAGHGCMGC SEPNFWDDMA DFEKPLGRQL LHGLDATADT VGAVILGATV
VGIGAHAVAS IFAKPLEE
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