| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2088 |
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| Symbol | |
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| ID | 1169832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2184640 |
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| End bp | 2185578 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343954 |
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| Product | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
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| Protein accession | NP_717691 |
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| Protein GI | 24373648 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAAGAC AGACCAAACA TTTTGACCGT CGTTTTCAAC TGGCTTTATT ACACCCTAAA
TATTGGGTCA CCTGGTTGGC GATTGGCCTA TTAGTGATTT TTGGGATCAT GCCAGCTTGG
CTGCGTGATC CTATTGCCAA AGTTTTGGCA AAACTCGTGG TTCCTATTGC GAAAAAGCCA
ATAGGGATTG CCCGAGCAAA CCTAAGCGCG TGTTTTCCTG AAAAGTCAGC GGCAGAAATT
GAAACCTTAA TTAACAACAA CGTTGAGAAT TTTGTCTTAG TGTTGTTATC TCAAGGCGAG
CTGTTGATCC GTTCAAAGGC CCATTTGCGC CGTCGTGTCA ATCTGATGGG ATTTGAACAT
GTAAAAGCTG CGCAGGCAGC AGGGCAACCA GTGATTTTTA TCATGCCGCA CGTGTGGCCC
ATTGATTATG CAGGGCTGAG ATTAAACCTC GAACTGCCTA TGGTGACTAT GGCCAAAGCC
CATAAAAATG GCTTATTCAA CTGGTTTAAT AATCGAGTAC GTAGCAGTTG TGGTGGCCAC
GTTTACATGC GTGAGGCAGG TATACGGGCC TTATTGGCCG AGCTTAAGCG TAATAACAGC
TTTTTTTATC TACCCGATGA AGATTTAGGC CCAGATCAAA GTGTGTTTAC GCCGTTTTTA
GGCACGGTAA AAGCCACATT GCCAGTGGTC GGGCGCTTGG CACAAGCGGG CAACGCGCAG
GTGCTACCTG TCAAAATTGG TTATAACCAA GTAACACGCC AGTTTGATTT GACTGTGATG
TCCGCTATTG CCACAGAAGA TATGGTGGGT AAAGAAAATG AGGCACTGGC GCTTAATAAA
GCGGTTGAGC AAGTGATCCT CGCTTATCCA GAGCAGTATA TGTGGTTCTT GAGATTATTA
AAGACTCGCC CTGAAGGGCA AGCCTCTATT TATCAGTAA
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| Protein sequence | MSRQTKHFDR RFQLALLHPK YWVTWLAIGL LVIFGIMPAW LRDPIAKVLA KLVVPIAKKP
IGIARANLSA CFPEKSAAEI ETLINNNVEN FVLVLLSQGE LLIRSKAHLR RRVNLMGFEH
VKAAQAAGQP VIFIMPHVWP IDYAGLRLNL ELPMVTMAKA HKNGLFNWFN NRVRSSCGGH
VYMREAGIRA LLAELKRNNS FFYLPDEDLG PDQSVFTPFL GTVKATLPVV GRLAQAGNAQ
VLPVKIGYNQ VTRQFDLTVM SAIATEDMVG KENEALALNK AVEQVILAYP EQYMWFLRLL
KTRPEGQASI YQ
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