Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2086 |
Symbol | pheT |
ID | 1169830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2181856 |
End bp | 2184243 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343952 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | NP_717689 |
Protein GI | 24373646 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA GCGAATCTTG GCTTCGTGAG TGGGTCAATC CCGCCGTTAG CCGTGAAGCA TTATCCCACC AGATCACTAT GGCTGGACTC GAAGTTGATG GCGTTGATGC CGTGGCTGCC GAGTTTAATG GTGTCGTGAT TGGTGAAGTG GTCGAATGTG GCCTGCACCC TGATGCAGAC AAATTACGTG TGACGAAAGT CAGTGTCGGT AGCAGTGAGC TTATCGATAT CGTCTGCGGT GCACCAAACT GCCGCCAAGG CTTAAAAGTA GCCGTGGCAA TGGTTGGCGC GGTGCTGCCA GGCGATTTTA AAATTAAAAA GGCTAAGCTG CGTGGTATGC CTTCAGAAGG CATGCTGTGT TCATACAGCG AGCTGGGCAT CGACATCGAC AGCGATGGCA TCATTGAGCT GCCATTAGAT GCGCCATTAG GCACGGATTT ACGTGAGTAT CTCAAGCTTG ATGATGCCGT GATTGAAGTG GATTTAACGG CTAACCGTGC CGACTGTTTG GGTATGGTGG GGCTTGCCCG TGAAGTCGGC GTGTTAAACC GTCAAGCGGT AACCGAGCCA CAGTGGCAAG CCGTTACGCC AACTACTGAT GCCAAAGTGA CTATTAACGT CAAAGAATCC GCAGCTTGCC CACGCTATTT AGGTCGTGTG GTGAAAAATG TGAATGTAAA AGCGGCAACA CCTCTGTGGA TGCAGGAAAA ATTGCGTCGT AGCGGTATCC GCTCAATCGA TCCCATCGTT GATATCACTA ACTTTGTGTT AGTTGAATTT GGTCAACCGA TGCACGCCTT CGATTTAGCT AAATTAACTG GCGATATCCA AGTGCGTTTA GGCAATGGCG AAGAGAAAAT CACCCTGCTC GATGGCAGCG AAGTGACTAT TCCAAGCGAT ACCCTAGTGA TCGCTGATGA CGCGCGTCCA TTAGCCCTCG CAGGTGTGTT TGGCGGCGAA TATTCAGGTG TCAGCGACAC TACCCAAGAC ATACTGCTGG AATGTGCGTT CTTCGCACCG TTAGCGATTA TGGGAAAATC ACGCCGTTTA GGTTTGCATA CCGATTCATC ACACCGCTTC GAGCGTGGTG TTGACCCAGA AATGCAACAT AAGGTTATCG ACCGTGCGAC TCGCTTAGTG CTTGATATTT GTGGCGGTGA AGCGGGCCCT GTGGTTGAAG CTAAATCTGA TGCTGACTTA CCAAAACCTG CACAAATTTT ATTACGTCGC AGCAAGTTAG ATAAAATCCT CGGTCACTAT GTTCCCGATA GTGATGTGGT TGAAATCCTC GAGCGTTTAG GTTTTAGCGT GGTGAAGGGT GAGGGTTGCT GGCAGGTCAT AACGGCGACG TATCGCTTCG ATATGGCGAT TGAAGAAGAT TTAATTGAAG AAGTTGCTCG CATCTACGGT TACAACAACA TTCCAAACGT TGCGCCGATA GCGTCATTGC GAATGTCGGA TCATAAAGAA ACCGACTTAA GCCTTAAACG CGTTCGTTCG TTGTTAGTGG CCCGTGGTTT CCAAGAGGCG GTCACTTACA GCTTCGTCGA TCCTAAGTTG CAAAATCTGG TGCATCCAGG TGAGCAAGCC ATGGTGTTAC CAAACCCAAT TTCCAGTGAA ATGTCGGCCA TGCGTTTGTC GATGTTTACC GGATTATTGA CTGCTGTCGG GTACAACCAA AGTCGTCAAC AGGGTCGCGT GAGACTTTTT GAAACTGGCC TTCGCTTTGT TCCTGATATT AATGCAGAAT CAGGTGTAAG ACAGCAAGCT ATGCTCGGTT GCGTCATTAC AGGGCCTCAA AATGACGAAC ATTGGGCTAT GGAATCGAAA ACTGTTGATT TTTTCGACCT TAAAGGTGAT TTAGAAGCAA TTATCGGCTT GACAGTTTCC GCATCAGAAT TTAGCTTTAG AGTAGCGACA CATTCTGCTC TGCATCCAGG GCAATGTGCT GAAATATTGA GAAATGATCG AGTCATCGGT CATATAGGTG CTATCCATCC TAGTTTGGAG AAACCTTTTG GACTCAATGG TAAAACCATC GTTTTTGAGT TGGAATTGGA TGCTTTATTG CATACCAGTT TGCCGCTAGC CCAAGCTGTA TCTAAGTTCC CGGCTAATCG TCGTGACATC GCGGTTGTTG TAGATGAAAG TGTATCTGCA GGTGATGTAA TGAAATTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CATAAACTTG TTCGATGTAT ACTTAGGTAA AGGTGTTGAG CCCGGCAAGA AGAGCTTGGC GATAGCACTA ACATTACAAG ACACTACTCG TACACTTGAG GAAAAAGAGA TCGCTGAAAC TGTAGAATCA GTTGTTTCTG CCCTGAAGAC CGAGTTCAAC GCATCGTTGA GGGATTAA
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Protein sequence | MKFSESWLRE WVNPAVSREA LSHQITMAGL EVDGVDAVAA EFNGVVIGEV VECGLHPDAD KLRVTKVSVG SSELIDIVCG APNCRQGLKV AVAMVGAVLP GDFKIKKAKL RGMPSEGMLC SYSELGIDID SDGIIELPLD APLGTDLREY LKLDDAVIEV DLTANRADCL GMVGLAREVG VLNRQAVTEP QWQAVTPTTD AKVTINVKES AACPRYLGRV VKNVNVKAAT PLWMQEKLRR SGIRSIDPIV DITNFVLVEF GQPMHAFDLA KLTGDIQVRL GNGEEKITLL DGSEVTIPSD TLVIADDARP LALAGVFGGE YSGVSDTTQD ILLECAFFAP LAIMGKSRRL GLHTDSSHRF ERGVDPEMQH KVIDRATRLV LDICGGEAGP VVEAKSDADL PKPAQILLRR SKLDKILGHY VPDSDVVEIL ERLGFSVVKG EGCWQVITAT YRFDMAIEED LIEEVARIYG YNNIPNVAPI ASLRMSDHKE TDLSLKRVRS LLVARGFQEA VTYSFVDPKL QNLVHPGEQA MVLPNPISSE MSAMRLSMFT GLLTAVGYNQ SRQQGRVRLF ETGLRFVPDI NAESGVRQQA MLGCVITGPQ NDEHWAMESK TVDFFDLKGD LEAIIGLTVS ASEFSFRVAT HSALHPGQCA EILRNDRVIG HIGAIHPSLE KPFGLNGKTI VFELELDALL HTSLPLAQAV SKFPANRRDI AVVVDESVSA GDVMKLIRKV GENQLVGINL FDVYLGKGVE PGKKSLAIAL TLQDTTRTLE EKEIAETVES VVSALKTEFN ASLRD
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