Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2064 |
Symbol | |
ID | 1169810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2158857 |
End bp | 2162117 |
Gene Length | 3261 bp |
Protein Length | 1086 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343932 |
Product | hypothetical protein |
Protein accession | NP_717667 |
Protein GI | 24373624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAAGA CGTCAATACC ACTGAAAAAG GATACCGTCG AACCCGCACT GCTGGCGAGC TCGGCTGCAA CGTCACATTC CCAAATGGTA GAAACTGGCG CGCCGCGGCG CAGAACTACA ATCAAAAAGC GCGTAAAACA AAGCCTTATC GCTACCACAT TGGCAGGTAT GTTAGCGGGT ATTGCGCTCA CCGTATGGAT TGTCAATAGT GAGACCGAAA CCCTTATTCT GCGCGCCGCC AATTATGCCT TAAGCGGCAT GGACAGTGAG CTGACCGATA TTCGTTTAGG CTCCATGGGC TTAGAACATT GGCAAATTCG CTCCGCTAGC ATTCGCGTGC ATGATTCGCA CTTAGTGGTA AAGGATCTGG ATATTCAACT TGAGCTTAAT TGGCCCAAAA GTGTTGCAGA ACTGCTGCAG CTTAGCCAGC TTGACGTCTT GAGCCAAAAA ATCAAACACA TTAGTACGGG CGAGATTGAA GTCGAACTCG GCCAATCACT CTTTGAGCGA AGCCCCAGCA TTGCCGATGA ACAAACGCCT GCAATACCTT TAAATATCAA ATCCTTGCCC TTAATTGAGA TAGGTAAAAC CACACTGAGC TTAACGGCGC AAGCCAATCA CAGCGCCTAT CAACTGGTGA TGGATAAACT CAGCCTTGAT AAACATGGGG AATTAACCAC TGCCTTTAGC CATGAGGACA AGCCGCTTGT CAGCTTAGCC GCAACACTTG GCAGCGATGA ATGGACGTTA AAGAGTGAAC TGAACATCGC GCCGCTGCTG GAGAGTCTGC ATCAAATTAG CCTGCACCAA ACGCCAACCA GTATTCTTAG CCAATTGATA CAATGGGATC AACAGTGGCA AGCGCTTGGC ATGACACTGA GTGGTCAGTT AGTCTCGCAA AGTACTTTCA AGCTCACGAC GGGCGATATA AAGAGTGACC ATCAGTTTAT CCAGCCGAGT GTCACTTTAG CGCATTTTGC AGATTTCACC TTAGCGCCAC AACCAGCTGT GGCGTTTAGT GTCAGTGGTT CATTAGCAGC ACTGAATCTA ACACTCGAAC CTTTTAGCCT TGCGTTAACG CCCAATGCCG CGCAACAAGC GCTGTTATTA GATGCCCTAA ATCACTCTTT GCAGTTAAAT GATAATGACT ATCAAACGCT TAACACTTTA CTCTCGGGGC TTAAAAGCAC CCAGTCCCCG ATTGGACTGG CATTCTTGAT GACTGAGCCG CTGCATTATA CCTTGGCAAA ATCAGATGAG CCGTTGACCT TGCCCGCGGT GGAATTATTC ACCTTAGGCA GTAAACTCGA GACGCGCATT CGCCTCACGA ACACTCGATT AGATAACGCG CACTTAACTC CAGCATCGGA TACATGGACG TTGCAAACTC AGTGGCACAT CGCGCTTCAA CAAAATACTC CGCTCAACTT ACGTGAACTT GACTTACACA AGCGCTGGCA AGATGCACCT CAAGCGTTAA ATTGGGGCTC GAGTGCTTTG CAAACTGCGG GAGTGATTAA TCTTAAACAG TCTGCCCAAG GCATCGATTG GCAACTTAAG ACTGCGCCCA TCTCCAAGGA GTCGACTGAC ACACTGCAAT TAACCCTTGG GGATATTCAC TTACAAAATG CGACACAAGC ATCTGACACT CAAAATAAAC AGACCCAGTT GGGCTTAGGC AATGTTCAGC TAAACGCCAA GGCTCCACTC ACAGTTAGCT CAACATCATT TTCAGCACAG GATGCGACTA CCGCGGCGGG GAGTCAATTT GCGCTTAACT TACCCCCAAT GTCACTCACG CTTAAGCAGC TGCGTTTTAG CCAAACGGTC GAAACGCTTG CAATAGACAA TGCCCATGCA CAACACCAAA CGCAGGCCTT AGATCACAGC ACGAAAACCA GTCTGAGCAG CCGCGACGAT ATCACTGTGC AGGATTTTTC CCTTGGATTA TCACAGGGCG TGGCAGTGAA TTTTTCGAGC CAAGACCCTT TTTTAACAGC GATTCAATCG AGCCAAATCA AAAATACACT CCACTGGCAA GCCAAACAGT TATCAATTGA AAAGCAGCTC TCGGCGAAGG GACGTACACG TAAACAAACT GTGCTTAAGC TGGATAACTT AGCCCTAGTG CAAGATTTAC ATTGGAAAAA TAGCACGCTT ATTGGTGATG AACAGTGGCA AGTCGGCAAT GTTCAACTTC AAAGCCATCA TCAATTGCAG CTCGCCAATG CAAACTTGCC ACTGCTGTTA ACTGGGCAAT GGGTGGTCGA TACCAGCATG ACAGAAGCAT TATCCCTGCT TAATCAAACT CAGCCGCTAC CCGCTGAATT AAATATGACC GGGCATAACC AATTACAAGC ACAATTTCAG CTGACACATC AGCCTGAACA GACCGAATTT GCGATGCAAA TTACCCAGTC GATGACCGAG CTTGAAGGTT TTTACAAAGA TACCCGCTTC GAGGGTGGAA AGTTACAGGC ACAGTGCGAG TTCACTTGGG GCCAATCCTA TAAAACGCCC CAAGCCTCAG GTGATCTTAG CAACTATTTT AGCAACTTAA GTCGCCTAAA TTGCCCTCAA ACAATCATGA CCTTTAGATT ATTCGACCCT GGATTCCCAT TCACCGATAT CGAGGTCAAT GCCGATATCG TCCTCGATAG AGATGCTGAG AAGCTCCCCG AGAATTGGCT ACAACAACTC ACGGGCTTAA GTGATACCGA TGTCTCAATG ACAGCTAAGG GCAACGTATT GAGCGGCCAG TTTTTACTGC CGGATTTTAA TTTAAAATTA CAGGATAAAT CACACGCTTA CTTGTTATTA CAGGGCATGG ATCTTGAAGA AGTGCTGCGG ATTCAACCCC AAATAGGCAT CTATGCCAAT GGCCTCTTCG ATGGCGTGTT ACCCGTGGAC TTAGTCGATG GTAAAGTGTC GATCAGCGGC GGCCAATTAG CCGCCCGTGC ACCTGGCGGT TTAATTGCTA TATCTGGCAA TCCGGCGGTA GATCAAATGC GCCAATCTCA GCCTTACCTT GATTTTGTAT TTTCAGCGCT TGAGCACTTA GCATACAGCC AGTTATCCAG TAGCTTCGAT ATGGATAACA CGGGCGATGC TACTCTATTG GTAGAAGTCA AAGGCCGCAG CCAAGGGATT GAACGTCCCA TCCACTTGAA TTACTCTCAT GAAGAGAACA TGCTGCAATT ATTCAGGAGT CTTCAGATTG GTAACGATCT GCAGAATAGA ATCGAAAAAT CCGTGAAGTA A
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Protein sequence | MVKTSIPLKK DTVEPALLAS SAATSHSQMV ETGAPRRRTT IKKRVKQSLI ATTLAGMLAG IALTVWIVNS ETETLILRAA NYALSGMDSE LTDIRLGSMG LEHWQIRSAS IRVHDSHLVV KDLDIQLELN WPKSVAELLQ LSQLDVLSQK IKHISTGEIE VELGQSLFER SPSIADEQTP AIPLNIKSLP LIEIGKTTLS LTAQANHSAY QLVMDKLSLD KHGELTTAFS HEDKPLVSLA ATLGSDEWTL KSELNIAPLL ESLHQISLHQ TPTSILSQLI QWDQQWQALG MTLSGQLVSQ STFKLTTGDI KSDHQFIQPS VTLAHFADFT LAPQPAVAFS VSGSLAALNL TLEPFSLALT PNAAQQALLL DALNHSLQLN DNDYQTLNTL LSGLKSTQSP IGLAFLMTEP LHYTLAKSDE PLTLPAVELF TLGSKLETRI RLTNTRLDNA HLTPASDTWT LQTQWHIALQ QNTPLNLREL DLHKRWQDAP QALNWGSSAL QTAGVINLKQ SAQGIDWQLK TAPISKESTD TLQLTLGDIH LQNATQASDT QNKQTQLGLG NVQLNAKAPL TVSSTSFSAQ DATTAAGSQF ALNLPPMSLT LKQLRFSQTV ETLAIDNAHA QHQTQALDHS TKTSLSSRDD ITVQDFSLGL SQGVAVNFSS QDPFLTAIQS SQIKNTLHWQ AKQLSIEKQL SAKGRTRKQT VLKLDNLALV QDLHWKNSTL IGDEQWQVGN VQLQSHHQLQ LANANLPLLL TGQWVVDTSM TEALSLLNQT QPLPAELNMT GHNQLQAQFQ LTHQPEQTEF AMQITQSMTE LEGFYKDTRF EGGKLQAQCE FTWGQSYKTP QASGDLSNYF SNLSRLNCPQ TIMTFRLFDP GFPFTDIEVN ADIVLDRDAE KLPENWLQQL TGLSDTDVSM TAKGNVLSGQ FLLPDFNLKL QDKSHAYLLL QGMDLEEVLR IQPQIGIYAN GLFDGVLPVD LVDGKVSISG GQLAARAPGG LIAISGNPAV DQMRQSQPYL DFVFSALEHL AYSQLSSSFD MDNTGDATLL VEVKGRSQGI ERPIHLNYSH EENMLQLFRS LQIGNDLQNR IEKSVK
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