Gene SO_2054 details

Gene Information

• Locus tag: SO_2054
• Symbol: adhC
• ID: 1169802
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2153860
• End bp: 2154999
• Gene Length: 1140 bp
• Protein Length: 379 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637343924
• Product: alcohol dehydrogenase class III
• Protein accession: NP_717657
• Protein GI: 24373614
• COG category: [C] Energy production and conversion
• COG ID: [COG1062] Zn-dependent alcohol dehydrogenases, class III
• TIGRFAM ID: [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAATG AAAAACCACA GTTTATCAAG TCTAAGGCCG CTGTGGCTTG GGGACCTAGA 
CAGCCGCTTA AGATTGAAGA AGTCGATGTG ATGTTACCTA AAGCTGGTGA AGTATTAGTG 
CGCATCGTGG CGACTGGCGT GTGCCATACC GATGCATTTA CCCTAAGTGG TGATGATCCT 
GAAGGTGTGT TTCCTGCGAT CCTTGGCCAT GAGGGCGGCG GGATTGTTGA GCAAGTGGGC 
GAAGGCGTGA CCAGCGTGCA AGTGGGCGAT CATGTGATCC CACTTTATAC GCCAGAATGC 
GGCGAATGTA AGTTCTGTTT ATCGGGTAAA ACCAATCTGT GCCAAAAGAT CCGTGCGACC 
CAAGGTAAAG GTTTGATGCC CGATGGCACC ACTCGCTTTT ATAAAGATGG CCAGCCGATT 
TTCCATTATA TGGGTTGTTC AACTTTTTCT GAATACACGG TATTACCTGA AATCTCATTG 
GCTAAGGTGA ATAAAACAGC ACCATTAAAA GAAATCTGTC TGCTCGGTTG TGGTGTCACA 
ACCGGTATGG GCGCGGTGAT GAATACCGCT AAGGTTGAAG CGGGCGCAAC CGTGGCGATT 
TTCGGCCTTG GTGGTATCGG CCTTTCGGCC ATTATTGGTG CGACCATGGC CAAAGCTAGC 
CGGATTATTG CCATCGATAT TAATGAATCC AAATTCGAAC TTGCCCGTAA ATTAGGGGCT 
ACCGATTGTA TTAATCCGAA AAATTTCGAT AAACCGATCC AAGAGGTGAT TGTCGAGATG 
ACCGATGGCG GCGTGGATTA CTCCTTCGAA TGTATCGGTA ATGTCAATGT GATGCGCAGT 
GCGCTTGAGT GTTGTCACAA AGGTTGGGGC GAGTCAGTTA TTATTGGCGT GGCAGGTGCT 
GGGCAGGAGA TCTCGACTCG TCCATTCCAA CTGGTGACGG GCCGCGTATG GCGAGGTTCG 
GCCTTTGGTG GTGTTAAAGG TCGCTCACAA CTGCCTAAAA TCGTTGAACA ATACCTTGCA 
GGTGAGTTTA AGCTCGATGA CTTTATTACT CACACTATGG GACTCGAACA AGTGAATGAG 
GCCTTTGACT TGATGCATGA GGGCAAGAGC ATTCGCAGCG TGATCCATTT CGATAAATAG 

 

Protein sequence

MSNEKPQFIK SKAAVAWGPR QPLKIEEVDV MLPKAGEVLV RIVATGVCHT DAFTLSGDDP 
EGVFPAILGH EGGGIVEQVG EGVTSVQVGD HVIPLYTPEC GECKFCLSGK TNLCQKIRAT 
QGKGLMPDGT TRFYKDGQPI FHYMGCSTFS EYTVLPEISL AKVNKTAPLK EICLLGCGVT 
TGMGAVMNTA KVEAGATVAI FGLGGIGLSA IIGATMAKAS RIIAIDINES KFELARKLGA 
TDCINPKNFD KPIQEVIVEM TDGGVDYSFE CIGNVNVMRS ALECCHKGWG ESVIIGVAGA 
GQEISTRPFQ LVTGRVWRGS AFGGVKGRSQ LPKIVEQYLA GEFKLDDFIT HTMGLEQVNE 
AFDLMHEGKS IRSVIHFDK