| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2053 |
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| Symbol | |
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| ID | 1169801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2152753 |
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| End bp | 2153628 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343923 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_717656 |
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| Protein GI | 24373613 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCTGT GGGATGGTAT CTCTGAGTTT GTCGCGGTGG CTGAAGCTGA AAACTTTACC
CTCGCTGCCC AGCGCTTAAA TGTCTCCACT GCCCATGTAA GTCGGCAAAT CGGTGCACTG
GAAAATCGTC TTGGTACTAA GTTGTTTTAC CGCACAACTC GCAAGGTGTC ACTCACCGAA
GAAGGCACGA TTTACTATCG CCATTGCCGC CAATTGCAGA CGGGATTAGA GGAAGCTGAG
CGGGCGATTA CCGATCTTAA AGACTCGCCT CAAGGACTGG TGAAACTCAC CGCGCCCGTG
GCCTACGGTG AAAAATTTAT TATGCCGCTA CTGAATGACT TTATGGTGCA GTATCCCAGT
GTGGAATGTA ATGTCGATTT GACGAACAGA ACCTTAGATT TGATTGAAGG GGGCTACGAT
TTGGCCATTC GACTAGGTAA ACTCGCCGAT TCAAGCCTGA TGGCTAAGCC CTTAAGCAGC
CGCACCCATT ATGTAGCGGC CTCGCCAAGT TACGTTGAAA AATATGGCGA ACCCCATACA
CTTTCGGAGT TAAATCAACA TAATTGCTTG ATCGGGAATC ACAATTATTG GCGCTTTATT
GAACATGGCC GTGAGCGAAA TTTTAAAGTA CGCGGCAAGC TGATCTGCAA CAGCGGTTAT
GCCCTGCGGG ATGCGGCATT AAAGGGTATT GGGATAGTAC AACTTCCTGA TTATTATATT
GAAGAGGATA TTCACGCCGG CAGGCTTATC TCCTTCCTCG ATACACACCG CGAAGCCAAA
GAAGGTATTT GGGCGCTCTA TCCGCAAAAT CGCCACCTAA GCGCAAAAGT GCGGGTATTA
GTGGATTATC TGGCGGAAAA ACTGACTGGC GGTTAA
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| Protein sequence | MYLWDGISEF VAVAEAENFT LAAQRLNVST AHVSRQIGAL ENRLGTKLFY RTTRKVSLTE
EGTIYYRHCR QLQTGLEEAE RAITDLKDSP QGLVKLTAPV AYGEKFIMPL LNDFMVQYPS
VECNVDLTNR TLDLIEGGYD LAIRLGKLAD SSLMAKPLSS RTHYVAASPS YVEKYGEPHT
LSELNQHNCL IGNHNYWRFI EHGRERNFKV RGKLICNSGY ALRDAALKGI GIVQLPDYYI
EEDIHAGRLI SFLDTHREAK EGIWALYPQN RHLSAKVRVL VDYLAEKLTG G
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