Gene SO_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2043 
Symbol 
ID1169792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2141450 
End bp2142097 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content47% 
IMG OID637343914 
Productputative sulfite oxidase subunit YedZ 
Protein accessionNP_717646 
Protein GI24373603 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAACA TCACGGCGTT AAGAGTCTCG CCAAAACAGC TGCTCTGGGT AAAGTTAGTC 
TTTCATTTGA TTGGGCTTAT CCCGATTACT TGGTTGGTTT TTACTGTGTT GTCGAGCCGG 
GCGGGCGGCG ACCCTGTGCA GCATATTATC CACTTTACTG GAATTGGCGC ACTCAATGCG 
CTACTGACAA CACTACTGAT TTCACCTATT GCCAAGAGAT TTAAGTTAGG TTGGTTAATG 
CAGACTCGAA GGCTTGTCGG CCTGTATGTG TTTGCCTATG CCACACTGCA TATTGTGGCG 
TTTTTCAGCC TAGATTTGTT GTTTGCGTGG GGGTTGTTTT TAAGTGAAGT CGCTAAACGG 
CCTTATATTT TAGTTGGCGC CGTGGCTTAT GTGATAGTGA GCGCCTTAGC GTTTACCTCA 
TTTAAGATCC TAATGCGTAA AATGGGGCGA CGCTGGCAAA CGCTGCACAA TGGGGTGTAT 
CTTGTGGCGA TACTGGCACC AATCCATTTT TATTGGTCAG TAAAATCCGA AATCGTTGAG 
CCTAGCCTGT ATATTCTCGG GTTTAGTTTG CTACTGGCCT GGCGTTTACC GATTTGGCAG 
AAGATGCGCA CCAGTCGTTT GGCAATGGCT GCAAAGGACA AGCAATAA
 
Protein sequence
MFNITALRVS PKQLLWVKLV FHLIGLIPIT WLVFTVLSSR AGGDPVQHII HFTGIGALNA 
LLTTLLISPI AKRFKLGWLM QTRRLVGLYV FAYATLHIVA FFSLDLLFAW GLFLSEVAKR 
PYILVGAVAY VIVSALAFTS FKILMRKMGR RWQTLHNGVY LVAILAPIHF YWSVKSEIVE 
PSLYILGFSL LLAWRLPIWQ KMRTSRLAMA AKDKQ