| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2040 |
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| Symbol | |
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| ID | 1169789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2136430 |
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| End bp | 2138355 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343911 |
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| Product | soluble lytic murein transglycosylase, putative |
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| Protein accession | NP_717643 |
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| Protein GI | 24373600 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCAACC CATTGACCAA GATGGTGTTA TCCAGCGCAA TTATTATCGC AGGTGCATTT
AATGCCTCTG CGGCTTTCGC TTTAACGTCT ACCCAAAAGA CCTTTATTGA GGCAGAAAAA
GCCTTAAAGA AACAAGATTA TGCAACCTAT AAACCCCTGC GCGCTAAGTT AGGTGAATAT
CCGCTGGCGA TCTATTTAGA CCATGATATG GATATAGGTA AACTCAACGA TTTACGCGGA
AATGATGCTA AGCTTTTGAT AGATAAGTAT CAAACGACAC CTATGTATCA GAGACTGCGT
TTAAAATACT TATTAAATGC TGGCGGCCAA AAACGTTGGA ACGATTTTCT GAGTTTGGCT
CAAGACGCGC CAACCGATGT CAGACTGCAG TGTTATTTTT ATGAGGCAAA ACTCGCCAAG
GGCGAAATCC AAACCGCCTA TACCGCCGCG CAGTCGCTGT GGATCTATGG CGATTCACGC
CCTAAAGAAT GTGACTCCCT GTTTAATACA TGGACTAAAG CGGGCAAGCG TACCCAAGAG
GTGATTTGGG CGCGGATGTT ACTGAGTTTC GATGAGGGGC AAACCAGCCT ACTGAGCTTT
CTATCGCAAA AAATCACTGT CCATAGCGCC GAAGCAAAAC GCTTGGTGGC GGTATTTAAA
GATCCGAATA GCCTGCGCCA CACCGAAAAA TTTAAGGATA AAAATCCGAT CGTTGGCGAT
ATCGTTGCTG CAGGCTTAAA GCGCCTTGCA CGTAAGGATC TCGACCAAGC CATCGATTTA
TATAGTCATT ATCAAAAAGC CAAACGTTTT AGTCCCGCAC AGGATCAACA GTTGCAAAAG
TATCTCGTGC GCCGCGTATT GATTGAGCAG GATGATAATT TTAAAGACTG GGCCGATAAT
CTACTCCCCG AGATGAAAAG CGACGATATG TTTGAACGTC GTTTACGTTG GGCGATTCGC
GAGCAGGACA GCACCCATAT TGCTCGCTAT TTAGATTTAT TATCACCTGA AACGCAATCC
AAAGAGCGCT GGCAATATTG GCTGTATCGC ACCAATGCCC AACACGCCCC TGAAAGCGCG
ACCAAAGCCC TAGCCGCCGT TAGCAATGAG CGCGGTTTTT ATGGTTTTGC CGCCTCTCAA
TTATTGAATA AACCCGTGTC TTTGAATAAA AGCCCAGAGC CTGTTGTTGA TGTTAACAGT
CCCAAAATAG AAGATGATTT GGGGTTTGTT CGCGTACAGG AGCTAATGGC GCTCGATCGT
TACTTTGACG CCCGTTATGA ATGGGTTGCC CTGCTTAAAC GCAGCAATAA TGACATGCGT
GCCCGCTACG GCCGTTATGC CCACGACCAA GGCTGGTACG ACTTTGGCGT CGAAGCCAGT
ATCCAAGGTA AACTTTGGGA CGATATTCCA CTGCGCTTCC CGGTAGCGCA TCAATCTGGT
TTTGAACATG CAAGTAAAAA ACACAAGGTC AATATCGATG AAATTCGCGC AATTAGCCGC
CGTGAGAGTG CATTTTACCT CTATGCCACT TCCGGCGTGG GTGCCCGTGG TTTAATGCAG
ATTATGCCGG CCACCGCAAA AGCCACCGCC AAAAAGCACG GTGCGAAATA TAACGATCCT
AAAGATCTTT ACAGTGCCGA ACTTAACTTA AACTTAGGCA GTGCCTATTA CGCCCAATTA
TTGAAGGAGT TCAATCAAAA CCGCGTGTTA GCCACAGCGG CCTATAACGC AGGCCCATCA
AGGGTTCGCC GTTGGTTATC GGAGTCAAAT GGTCAACTCG ATGCCATGAG TTTTATCGAG
TCCATTCCCT TCACCGAAAC CCGAGAATAT GTCCAAGCCG TGCTAAGTTA TCGCTTGATT
TATGAAGCGC AAAAACAAAA ACCATTGCCC TTGTTTAACG AGGCTGAGCT AAAGTTTCAC
TATTAA
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| Protein sequence | MCNPLTKMVL SSAIIIAGAF NASAAFALTS TQKTFIEAEK ALKKQDYATY KPLRAKLGEY
PLAIYLDHDM DIGKLNDLRG NDAKLLIDKY QTTPMYQRLR LKYLLNAGGQ KRWNDFLSLA
QDAPTDVRLQ CYFYEAKLAK GEIQTAYTAA QSLWIYGDSR PKECDSLFNT WTKAGKRTQE
VIWARMLLSF DEGQTSLLSF LSQKITVHSA EAKRLVAVFK DPNSLRHTEK FKDKNPIVGD
IVAAGLKRLA RKDLDQAIDL YSHYQKAKRF SPAQDQQLQK YLVRRVLIEQ DDNFKDWADN
LLPEMKSDDM FERRLRWAIR EQDSTHIARY LDLLSPETQS KERWQYWLYR TNAQHAPESA
TKALAAVSNE RGFYGFAASQ LLNKPVSLNK SPEPVVDVNS PKIEDDLGFV RVQELMALDR
YFDARYEWVA LLKRSNNDMR ARYGRYAHDQ GWYDFGVEAS IQGKLWDDIP LRFPVAHQSG
FEHASKKHKV NIDEIRAISR RESAFYLYAT SGVGARGLMQ IMPATAKATA KKHGAKYNDP
KDLYSAELNL NLGSAYYAQL LKEFNQNRVL ATAAYNAGPS RVRRWLSESN GQLDAMSFIE
SIPFTETREY VQAVLSYRLI YEAQKQKPLP LFNEAELKFH Y
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