| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2017 |
|---|
| Symbol | |
|---|
| ID | 1169769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 2116457 |
|---|
| End bp | 2117320 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637343892 |
|---|
| Product | thioredoxin-like protein |
|---|
| Protein accession | NP_717623 |
|---|
| Protein GI | 24373580 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAATA TCCTCGATCT AACCAAAGAC AATATTCAGC AAGTGGTTGA TGCTTCGATG
CAGCAACTGG TGGTGATGGT ATTTTGGGCC CAGCCACAGC CGCAGAGTGT TGCCATGGTG
CAAACACTCG AGCAACTTGC CACGCAGCAT GCTGGCCGTT TTGTGCTAGC GAAAGTGAAC
TGTGAAGCCG AACTGGAAAT CGCGAACTAT TTCCGTATTC AAGCTTTGCC GACCACTTTA
GTGCTCGATA AGGGTCAGCC AATTGATGGT TTTGCGGGGC TGCAAGAGGC GGTGCAGGTG
AGCGCCATGC TCGAAAAGCA TTTGCCGCCA TTGTGGCAAT TGCAACTTGA GCAAGCCAAA
GCCTTGTTAG CCTTAACCCA AGTGTCGGCG GAAGATTTAA CCACCGCGGC CGTGTTACTG
AAAGACGCTT ATAGCGCCTC AAATCATGCC GCTGAGGTGA GTTTAGTGCT TGCCGATGTG
TACTTGATGC AGGGTGAACT AGCCCAAGCG CAAGGGTTAC TTGAGCAAAT TGGCCTTGCC
GATCAAGACG GTTATTATCA GAGTTTAAGA GCCAAACTGA CACTGGCGCT CGATGCGGCG
GATACCCCTG AAATTCGCGA ACTACAGCAA AAATTCGAGC AAAACCCACA TGATTTAGTG
TTATTACTCG AACTTTGTAA GGCGCTGCAT TCGGCCCACC GCGATGAAGA AGCTCTCACC
CATTTATACG GCGTATTATC TAAGGATTTA AGTGCTGAAA ATGGCAAGGT AAAACAAACC
TTTATGGAGA TTTTGACTGC GCTTGGCCAA GGTAATAGTT TGGCAAACCA ATATCGCCGT
AAGCTTTATA CCTTGCTCTA TTAA
|
|---|
| Protein sequence | MDNILDLTKD NIQQVVDASM QQLVVMVFWA QPQPQSVAMV QTLEQLATQH AGRFVLAKVN
CEAELEIANY FRIQALPTTL VLDKGQPIDG FAGLQEAVQV SAMLEKHLPP LWQLQLEQAK
ALLALTQVSA EDLTTAAVLL KDAYSASNHA AEVSLVLADV YLMQGELAQA QGLLEQIGLA
DQDGYYQSLR AKLTLALDAA DTPEIRELQQ KFEQNPHDLV LLLELCKALH SAHRDEEALT
HLYGVLSKDL SAENGKVKQT FMEILTALGQ GNSLANQYRR KLYTLLY
|
|---|
| |