| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2013 |
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| Symbol | dnaX |
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| ID | 1169765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2109971 |
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| End bp | 2112979 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343888 |
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| Product | DNA polymerase III, gamma and tau subunits |
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| Protein accession | NP_717619 |
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| Protein GI | 24373576 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATATC AGGTGTTAGC CAGAAAATGG CGCCCTGCCA CATTCGAACA GATGGTCGGC
CAAAGCCATG TGTTACACGC GCTCACTAAT GCGTTAACGC AGCAACGTTT ACACCACGCT
TATCTTTTTA CAGGTACACG CGGGGTGGGT AAGACCAGCT TGGCACGACT CTTTGCTAAA
GGCTTAAACT GTGAAACTGG TGTAACGGCT TCCCCCTGCG GCGTCTGTGG CAGCTGTGTC
GAAATCGCCC AAGGTCGTTT TGTTGACTTA ATTGAAGTCG ATGCGGCGTC CCGCACTAAG
GTCGATGACA CCCGTGAACT CTTAGATAAT GTGCAATATC GCCCGACCCG AGGCCGTTTT
AAGGTTTATC TAATCGATGA AGTGCATATG CTGTCCCGTA GCAGTTTTAA TGCATTGCTT
AAAACCCTTG AAGAACCACC CGAGCATGTA AAATTTCTGC TGGCCACTAC CGATCCGCAA
AAGCTGCCAG TGACTGTGTT ATCCCGTTGT TTGCAATTTA ATTTAAAGAG CTTAACCCAG
CAGGAAATTG GCACTCAGCT ACAACATATT TTAACCCAAG AGCAATTGCC CTTTGAGCAC
GAAGCCTTAG GCCTACTCGC CAAATCGGCT AACGGCAGTA TGCGTGATGC CTTAAGTTTG
ACCGATCAAG CGATTGCTTT TGGTGGCGGC ACTGTGATGC TCAATCAAGT GCAATCCATG
CTCGGTAGTA TTGATGAGCA GCATGTGCTG GGCTTACTCA AAGCCTTAAC TGACGCTGAT
ATTGGCGCGT TGATGCAAAG CTGTGCCCAG GTGCTGGCCT ATGGCGCAGA TGCCCAAGAA
GTGCTGCGCA GTTTACTGGA ATTACTGCAT CAAATTACCC TGACACAATT TGCGCCCGCG
GCGGCGCAGC AATCTCTGTA TAGTGCGCAA ATTCAAGCGT TTGCAGAGCA GTTAGCGCCT
GAACAAGTGC AACTGTATTA CCAAATTTTA CTCACGGGCC GCAAAGACTT GCCCCATGCA
CCTGATCCTA AGTCAGGGCT TGAAATGGCA TTGCTGCGTG CTGTTGCTTT TGTCCCCGAA
AAAAGCGTTA AGCGCTGGCA AGTGGATGAC GCGGTTAAGG TGGATTTGTC TGCCCAACCT
GCTTTAACCC CACAAGCTAC AATACCACCA GAGGTTCCAG CGGAGAGACA ACTGGCCGTA
AATGCGCCTG TGGCTGAAAA AAAAACGCTG TTAGCAACCG TCGCTAATCC AGAGGCGCAG
TTGCAAGCAG AGACAACGCC TGAAACTGCG TTAGAGGATG ATGAGCCTGA ACTTAATGCG
GCGCTGATTG CCGAGCAGCA AGTGATCTTA AGCCAAGCCC AAAGCCAAGG TTTTGGCGCA
AGTGCTGATC CGGTTGTAAG TTCAAATACG GCGCTTAATC AAGATGTTAA TTCATCAGAT
CCTACAGATC CAGATACAGC ATTGACCGAG CAGACTGCTA CTGAAGATGT CTTAGATGCT
CAAAATACAG CAGGGGATTT AGCGCCAGAG CCTTATGTAG CAGAAGCATA CGGGCAGTAT
GACTATGCTC AATCCAACGA TGCTCAATCC AACTACGCAC AATTCAATCA TGCTCAAAGC
TATGATACAT CGACGCCACT TGATGCTTAT CAGGATGATT ACGCGCATTT TATGTCTGAG
GATGCAGCTG AGCAGCTTAT TATATCTGAG CATGCAGTAG AGCAACTTAG CGCGAGTGAA
GGCAATCTGT TTAGCAATGG CAGCGCCCAA CATAGTGCGT CAAACCAGAC AGGACAAGTG
TTTGCCGTCG ATAATACTCA GGTAGCGAAA GCGGCTGTAT CCCTTGAGGA TGACGATATT
TTATCGGCAG TATTAGCAGC GCGGGAATCA TTACTGTCGG ATCTCGATGC GTTAAGCACG
AAGGATGGTG ATGGAAAAAA GTTATCTCCT GACGTTAAGG CAAAAACGCC GACTTCGAAT
GCTCACTCTA GGCCAGCAAC AAGCGTCAAT GTGAGTCCTC GTCCTGGACA AAATGCCGTA
ACTTTAGAAT TTGAAAGTGA TTTCGAACTG CCCTTTGACG ATGATTTTGA GGCTGAGATT
TATACCAAGC CTGAGTTGAG CACTAAAGCG ACCAATGCGC CGCTTGCACC ACTTAGTACT
CGGCCCATAA CCCACTCGAT TATTGTTCCA TCTACTCAGC AAAGTGCAGC AGCGCAGCAT
CTGCCGCTTG ATCCCAATGA TCGTCCGCCA TGGGAGGACG CGCCTGTGGC TGAGTGCCAC
CATGGGAATG CTGAACCCAT AACGACATCG CGCCAAGTGA ATGAAGAAAG CCATCTGCGC
CAAGAAAGTG CAGCGCTTCA CGCGCCTTTA TTGGCAGTTG AGCCTGTTCA GGTTGCACCT
GCGCTGACTT TGCCTACAAA TACTCAAGCG GCTCAAGTCG AGCAAGCAGC AGGGCAGAGT
CATCAGTTGA ATCACCCTGA TGAAGTACCT GCAACGCCAC CGCGCGAGCT AGACGCCGCC
GCGCCGCCTG CGCCTGCAAG TGACCTAACG GTCGCGCAAT CTATCACGGG TCATCCCTTG
GATTTACATT GGTACAAGTT AATGGCGAGC CTTGATATTG GCGGCCGTGT GCGCCAATTA
GCGGTAAACT CGATTTGTCA GGTGCAGAGC AATCCCTTGC CATTGCTGTT AAAACCGGAT
CAAAAACACT TGGCGGCACA GGTGGCTATT GAGCAATTAG AGCAAGCCTT AACCGCAGCC
CTTGGTGCTC CAAGGCAGGT TGAAGTGGTC ATCGGAACCG ATCCTAGCCG GGAAACGCCC
TTAGAACTGC GTAAGCGTTT TCACCAAGAG TTGCTGCAGC AGGCGCGGCA ATCGCTGATA
ATGGATGATA ATGTGCAATG GCTTATCAAC CGCTTTGGGG CTGAGCTTGA AAATGATAGC
TTGCTCTATC CACCAGAGCT GTTAAACCAA CGCAGCGGGC TTATCCCTGC GTTACCTGAG
CCTGAGTGA
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| Protein sequence | MSYQVLARKW RPATFEQMVG QSHVLHALTN ALTQQRLHHA YLFTGTRGVG KTSLARLFAK
GLNCETGVTA SPCGVCGSCV EIAQGRFVDL IEVDAASRTK VDDTRELLDN VQYRPTRGRF
KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTVLSRC LQFNLKSLTQ
QEIGTQLQHI LTQEQLPFEH EALGLLAKSA NGSMRDALSL TDQAIAFGGG TVMLNQVQSM
LGSIDEQHVL GLLKALTDAD IGALMQSCAQ VLAYGADAQE VLRSLLELLH QITLTQFAPA
AAQQSLYSAQ IQAFAEQLAP EQVQLYYQIL LTGRKDLPHA PDPKSGLEMA LLRAVAFVPE
KSVKRWQVDD AVKVDLSAQP ALTPQATIPP EVPAERQLAV NAPVAEKKTL LATVANPEAQ
LQAETTPETA LEDDEPELNA ALIAEQQVIL SQAQSQGFGA SADPVVSSNT ALNQDVNSSD
PTDPDTALTE QTATEDVLDA QNTAGDLAPE PYVAEAYGQY DYAQSNDAQS NYAQFNHAQS
YDTSTPLDAY QDDYAHFMSE DAAEQLIISE HAVEQLSASE GNLFSNGSAQ HSASNQTGQV
FAVDNTQVAK AAVSLEDDDI LSAVLAARES LLSDLDALST KDGDGKKLSP DVKAKTPTSN
AHSRPATSVN VSPRPGQNAV TLEFESDFEL PFDDDFEAEI YTKPELSTKA TNAPLAPLST
RPITHSIIVP STQQSAAAQH LPLDPNDRPP WEDAPVAECH HGNAEPITTS RQVNEESHLR
QESAALHAPL LAVEPVQVAP ALTLPTNTQA AQVEQAAGQS HQLNHPDEVP ATPPRELDAA
APPAPASDLT VAQSITGHPL DLHWYKLMAS LDIGGRVRQL AVNSICQVQS NPLPLLLKPD
QKHLAAQVAI EQLEQALTAA LGAPRQVEVV IGTDPSRETP LELRKRFHQE LLQQARQSLI
MDDNVQWLIN RFGAELENDS LLYPPELLNQ RSGLIPALPE PE
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