| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1986 |
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| Symbol | |
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| ID | 1169742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2089099 |
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| End bp | 2089767 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637343865 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | NP_717593 |
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| Protein GI | 24373550 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAATT TTCAATCACA TTTAGCGCAA AATCGCTATG ATAGGCAGTT ATCGCCCCCT
ATCGAAATGG CTATGGAAAA CGATAACCAC AATTTAACCG CCGACGAACA TATAACGGAT
ATCGATCCTT TGGTGAGCGC CATCATCAAA GTTGCTAATC AAAGGGATAA AGCGGCATTT
GGCTATTTGT TCAGCCACTT CATGCCCAAA ATTAGAGCAT TTGGTCTGCA ACGATTAAAT
CAACAAGGCT TAGCCATGGA TTTAGTTCAA GAGACCATGA CCACCGTTTG GACCAAATCA
CACTTATACA ATGCGGACAA AGGGTCTGTC GCCACGTGGG TCTTTACCAT CATGCGTAAC
CAATGTTTCG ATATGCTAAG ACGGGTACAG CATAACCGAG AAGATGCATT TGGCGACGAT
ATCTGGCCAC TTTATGACGT TGCTGTTAAC CAAGATAATA ATCCTGACCA TAAATTGACC
GCCAAGTTAC TCGCTCACTT AGATGCCCTG CCCCTTGCAC AACGCCAAGT AGTACAAGGC
ATTTATATGC AAGAACTCAC CCAGCAAGAA CTGGCCGATG CCTTAAAAGT CCCCATTGGC
ACGATTAAAT CGCGACTAAG ATTGGGGCTG GAAAAGCTTA AAAGCTTTTT GGAGACACAA
CATGATTAA
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| Protein sequence | MENFQSHLAQ NRYDRQLSPP IEMAMENDNH NLTADEHITD IDPLVSAIIK VANQRDKAAF
GYLFSHFMPK IRAFGLQRLN QQGLAMDLVQ ETMTTVWTKS HLYNADKGSV ATWVFTIMRN
QCFDMLRRVQ HNREDAFGDD IWPLYDVAVN QDNNPDHKLT AKLLAHLDAL PLAQRQVVQG
IYMQELTQQE LADALKVPIG TIKSRLRLGL EKLKSFLETQ HD
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