Gene SO_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1979 
Symbol 
ID1169738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2083546 
End bp2084259 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content45% 
IMG OID637343861 
ProductMutT/nudix family protein 
Protein accessionNP_717586 
Protein GI24373543 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAG CGGAATATCT CGCCAATTAC GATCCTAAGG CTTTTAAGGC TCAGCTACTG 
ACGGTTGATG CCGTATTGTT TACCTACCAT GATCAGCAGC TTAAAGTACT CTTAGTACAA 
CGCTCAAACC ATCCCTTTTT AGGTTTGTGG GGATTACCGG GAGGCTTTAT CGATGAAACT 
TGCGATGAAT CCCTTGAGCA AACTGTGTTA CGTAAACTTG CGGAAAAAAC TGCAGTAGTG 
CCACCTTACA TTGAACAGTT ATGCACTGTG GGTAATAACA GTCGCGATGC GAGAGGCTGG 
TCGGTGACTG TGTGTTATAC CGCCTTGATG AGTTATCAAG CCTGCCAAAT CCAGATTGCT 
TCAGTGAGTG ATGTTAAGTG GTGGCCATTA GCGGATGTGT TACAGATGCC CTTGGCATTT 
GATCATCTGC AGTTAATTGA GCAAGCGCGG GAACGCTTAA CACAAAAAGC CTTATATTCT 
TTAGTGCCAG GATTTGCACT GTCTGAACCT TTTACCTTGC CAGAATTGCA GCATGTACAT 
GAGGTTTTAC TGGGCAAGCC TATCCAAGGG AAATCTTTTC GTCGGCGAGT TGAACAGGCC 
GATTTATTGA TTGATACCGG ATTGAAGCGC ACCGAACGGG GACGTCCTGC TAATTTATAT 
TGCTTGAAAC CTGATACGGC ATCGTATCGC TTCTTAAGAA ATTTAGAATG TTGA
 
Protein sequence
MTEAEYLANY DPKAFKAQLL TVDAVLFTYH DQQLKVLLVQ RSNHPFLGLW GLPGGFIDET 
CDESLEQTVL RKLAEKTAVV PPYIEQLCTV GNNSRDARGW SVTVCYTALM SYQACQIQIA 
SVSDVKWWPL ADVLQMPLAF DHLQLIEQAR ERLTQKALYS LVPGFALSEP FTLPELQHVH 
EVLLGKPIQG KSFRRRVEQA DLLIDTGLKR TERGRPANLY CLKPDTASYR FLRNLEC