| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1971 |
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| Symbol | |
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| ID | 1169731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2075392 |
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| End bp | 2077128 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343854 |
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| Product | AMP-binding domain protein |
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| Protein accession | NP_717578 |
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| Protein GI | 24373535 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTTT CAACGAATCA AGTAACAAAT CAAGCAACTA ATCAAACCAT TAGTCCCCTT
AAATACAGTG AGTTCCGGGG GCCTAATGCC CCGGAACTTG TTGAAAAAAC CATAGGGCAA
TACCTTGACG ATATCGCTAA CACCTATCCA GAACAGTTAG CTGTTGTCGT TAACCATCAA
GATATTCGTT GGAATTACCG TCAATATCTT GCGCGAATCG ATGCCCTTGC CGCGGGCTTG
CTCAAATTGG GTATAGGTCC CGGTGATCGG ATCGGTATTT GGTCACCTAA TAATATTGAA
TGGTGTTTAA CCCAATTCGC CACCGCCAAA ATTGGCGCCA TCATGGTGTG TATTAACCCC
GCTTATCGCC CTGAAGAATT ACAATATGCT CTGACTAATG TGGGTTGCCG AGCGGTGATC
TGCGCTGACA AATTTAAATC CAGCAACTAT TTGCAGATGC TTTATACGCT GGCGCCTGAG
CTAAAGGAGT GCGCCGCGGG TCAATTGCAG GCTAAGGCAT TACCAGAGTT GCAGTTTGTT
ATCCGCATGG GGGCTGAAAA GTCTCCCGGC ATGTTGAACT TCGATGACTT ATTAGTCGAG
GTGAGCGCAG ATGATAAGGC AATGCTTGAG CGTATCGCCA ACGGACTCAG CCCCTATGAT
GCTATCAATA TTCAGTTTAC CTCTGGCACA ACAGGTAGTC CCAAAGGGGC GACCTTATCA
CACCATAACA TCTTGAATAA CGGTTACTTA GTGGCCGAGG CAATGAAGTT TACCTGTGAC
GACAAGCTCT GTATCCCTGT GCCTTTATAC CATTGTTTTG GTATGGTGTT AGGTAACCTC
GTTTGCTTAG CTAAGGGCGC TGCGGCTGTA TTTCCGGGAG ATTCTTTCGA TCCGCTTACC
ACCTTAGAAG TGGTTGAGCG CGAGCGCTGC ACCGCACTGC ACGGTGTTCC CACCATGTTT
ATTGCCGAAT TAGAACATCC TGAATTTACA CGTTTTGATC TCAGTTCGTT ACGTACGGGC
GTGATGGCGG GGGCGACTTG CCCTGAAGAA GTTATGCGCC GTGTACAACA GCTAATGTAT
ATGCAGGAAG TGTTAATTGG GTATGGCCAA ACCGAGTGCA GCCCGCTGAA TCACATTACC
GAAATCGATT CTCCAGTGGA GAAGCGTGTT CTCACCGTCG GCCGTGCGTT GCCCCATACC
GAAGTGAAAA TTGTCGATGA ATTTGGCGAA GTGCTGCCGA TTAATCAGCC CGGTGAAGTT
TGTAGCCGAG GGTATTGCAT CATGCAGTGC TACTGGAATG ATCCTGAAAA AACCGCGGCT
ACGATTGACC GCGAAGGTTG GTTACATTCT GGCGATATTG GTCAAATGGA TGAACAGGGT
TATGTGCAAA TCGTTGGCCG TATTAAAGAT ATGATTATTC GCGGTGGTGA GAATATCTAT
CCCCGTGAAA TTGAAGAAAA ACTCTATACC CATAAAGATG TGCAGGATGC CGCGGTGTTT
GGGGTACACA GTGATAAATA TGGTGAGGAA GTCTGTGCCT GGATCAAGGT CCGCTCAGGG
GCGACGATCA AAGAGGAAGA TATTCGTCAT TTCCTCACTG AAAAGTTCGC CTATTTTAAA
GTGCCACGTT ACATCAAATT TGTGGACCAA TACCCAATGA CTGTTACGGG TAAAATCCAA
AAATTCAAAA TGCGTGAGTT GATGTATCAA GAGTTGTACG AAGATATTAA TGCCTAA
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| Protein sequence | MSVSTNQVTN QATNQTISPL KYSEFRGPNA PELVEKTIGQ YLDDIANTYP EQLAVVVNHQ
DIRWNYRQYL ARIDALAAGL LKLGIGPGDR IGIWSPNNIE WCLTQFATAK IGAIMVCINP
AYRPEELQYA LTNVGCRAVI CADKFKSSNY LQMLYTLAPE LKECAAGQLQ AKALPELQFV
IRMGAEKSPG MLNFDDLLVE VSADDKAMLE RIANGLSPYD AINIQFTSGT TGSPKGATLS
HHNILNNGYL VAEAMKFTCD DKLCIPVPLY HCFGMVLGNL VCLAKGAAAV FPGDSFDPLT
TLEVVERERC TALHGVPTMF IAELEHPEFT RFDLSSLRTG VMAGATCPEE VMRRVQQLMY
MQEVLIGYGQ TECSPLNHIT EIDSPVEKRV LTVGRALPHT EVKIVDEFGE VLPINQPGEV
CSRGYCIMQC YWNDPEKTAA TIDREGWLHS GDIGQMDEQG YVQIVGRIKD MIIRGGENIY
PREIEEKLYT HKDVQDAAVF GVHSDKYGEE VCAWIKVRSG ATIKEEDIRH FLTEKFAYFK
VPRYIKFVDQ YPMTVTGKIQ KFKMRELMYQ ELYEDINA
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