| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1946 |
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| Symbol | phoP |
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| ID | 1169706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2049116 |
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| End bp | 2049790 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637343829 |
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| Product | transcriptional regulatory protein PhoP |
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| Protein accession | NP_717553 |
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| Protein GI | 24373510 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATTT TGGTTGTTGA AGATGATCTT ATTTTATCCC ACCATCTAAA AGTACAACTA
AGTGACTTGG GCAACCAAGT TCAAGTTGCC CTCACTGCCA AGGAAGGATT CTTCCAAGCA
ACCAATTATC CCATAGATGT CGCGATTGTC GATTTAGGTT TACCCGATCA AGATGGTATC
AGCCTTATCC AGCAATTACG TGAAGAAGGC GTTAAAGCCC CCATTCTTAT CCTCACGGCG
AGGGTGAATT GGCAAGATAA AGTTGAAGGC CTCAATGCGG GCGCAGACGA TTACTTAGTT
AAACCCTTCC AAAAAGAAGA ACTTGTTGCA AGGCTTGATG CCTTGGTCAG ACGCAGCGCA
GGGTTTGTCA AACCTGTTAT TACCAGTGGT GAGTTAAAAC TCGATCTTGC CGCTAAACAA
GTGACCCTCG GTAATGACAT CATGGAAGTC ACCGCCTTTG AGTATCTTAT CCTCGAATAT
TTAATGCGCC ATTGCCACGA GGTAGTAGCA AAGCAGCGGC TGCTAGATGT GATCTATGGC
GACAAAGAAG GCGACCCAAA TACTATTGAA GTCATGGTGA GCCGTTTACG TAAAAAACTG
ACCCGCGATG GAATAGATAA TCCGATAGCG ACAATCCGTG GCCAAGGATA TAAATTCAAT
CTGCCATGCA ACTAA
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| Protein sequence | MRILVVEDDL ILSHHLKVQL SDLGNQVQVA LTAKEGFFQA TNYPIDVAIV DLGLPDQDGI
SLIQQLREEG VKAPILILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA
GFVKPVITSG ELKLDLAAKQ VTLGNDIMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG
DKEGDPNTIE VMVSRLRKKL TRDGIDNPIA TIRGQGYKFN LPCN
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