| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1945 |
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| Symbol | phoQ |
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| ID | 1169705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2047776 |
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| End bp | 2049125 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343828 |
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| Product | sensor protein PhoQ |
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| Protein accession | NP_717552 |
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| Protein GI | 24373509 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTAA GACTCAAGTT TAAGAAACGT CTACTCACGC GGATGTTTCT CACCTCGCTA
TCCATCATCA CCTTAGTGGG GTTTGGCCTC GCATGGATGG TGAACGTTCT GCATGCTCAA
AATAGTTATA ACGAAGAAAC CGCCCAGCTC ATCGCCGAAA TTCCTCAAGT CGCCGCCGAA
CTGAGGGAGC ATGATCTCAT CCCCGATACC AGTGCTTGGT TAGAGGAAAA CAACAAGCAA
GAACGCTATG TGATTGCTAG TTGTGATGAA AAGTTTAAAC AAGTATGGAC CTCATCCCTC
GCCGTCGACC GTGGCCTATT CGATACCTGC GAACGATTTA ACGAAATCCG TAACGACTCT
CCGCCCTATT ACCTCACTAT GGCAGATGAC AGAGGTTACT TTGTGTATTT GCTCGCGGTT
GAAATCGCAG GCGTGCATTA CAATCTGCTG GTGATGAAAG ATGCCGCTAA ACTGGAGCAG
GAATATAGTA AATTCAGTAA ACGTACCTAT ATCCGTCTTG CGATGGTGCT CGCATTAGCC
CTTATTTTAC TGGTTAGTGC CGCGTATTGG GGGATGCGCC CGCTCGTCAG AATGCAAAAT
GAACTTCAGT CGATTAACCA AGGTAAGACG AAATCTCTGT CTGAAGGCTA TCCCGTTGAA
CTCGAAGGGG TAACTCAAGC GCTTAACCAG CTATTACAAC AATCGAGCGC TCAACAGCAA
CGCTATCAGA ATGCAATGAA TGATCTGGCA CACAGCTTGA AAACTCGCCT CGCCGCCGTT
CATGCCATTA CCGACGACAC AAGTCTCAAT AAACAATCTG CCAATGAAAA AATCATGGAG
CAGATCAGCC AAATGGATCA ACTGGTTAAA TATCAACTAA AACGCGCCAT GTTAGGTCGC
CAAGGGTTAA AGCAAGAACA CACCCCCATT GCGCCACTTG TTGAACAACT CGCACAAATG
CTATTTAAGA TTTACCGCGA TAAACAAGTA CAATTTAAAG CCAACATTTC GGCTAATTTA
TTGTTTCCTG GCAATAAAGG CGATTTGATG GAACTTTGCG GCAATTTAAT GGAAAACGCC
TTTAGATTAT GTATTAGCCA AGTACAGGTG ACGGCACATT TTAATGAGCA GGGTGATTTT
GAGTTAATCG TCGAAGATGA TGGCCCAGGC GTAGAAGAGC AATTGCGGCA AAAAATCATT
CAACGGGGCG TGAGAGCCGA CACCCAATCC CCAGGACAAG GGATTGGTTT AGCCGTATGT
GATGAAATTG TCAGTAGCTA TGGTGGAAGC CTGAAAATAG AGGAAAGCCA TTTAGAAGGC
GCACTATTCA GGATTACCAT CCCTGCCTGA
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| Protein sequence | MQLRLKFKKR LLTRMFLTSL SIITLVGFGL AWMVNVLHAQ NSYNEETAQL IAEIPQVAAE
LREHDLIPDT SAWLEENNKQ ERYVIASCDE KFKQVWTSSL AVDRGLFDTC ERFNEIRNDS
PPYYLTMADD RGYFVYLLAV EIAGVHYNLL VMKDAAKLEQ EYSKFSKRTY IRLAMVLALA
LILLVSAAYW GMRPLVRMQN ELQSINQGKT KSLSEGYPVE LEGVTQALNQ LLQQSSAQQQ
RYQNAMNDLA HSLKTRLAAV HAITDDTSLN KQSANEKIME QISQMDQLVK YQLKRAMLGR
QGLKQEHTPI APLVEQLAQM LFKIYRDKQV QFKANISANL LFPGNKGDLM ELCGNLMENA
FRLCISQVQV TAHFNEQGDF ELIVEDDGPG VEEQLRQKII QRGVRADTQS PGQGIGLAVC
DEIVSSYGGS LKIEESHLEG ALFRITIPA
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