| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1930 |
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| Symbol | sucA |
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| ID | 1169692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2034323 |
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| End bp | 2037142 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343815 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | NP_717537 |
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| Protein GI | 24373494 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAAG GCATCATGAA AGCCTGGCTC GAATCATCTC ACTTAAGTGG TGCAAATTCG
ACCTACGTAG AAGAGATGTA TGAAGCCTAT CAAGAAGACC CTCAGTCAGT TTCTGACGAT
TGGCGTGCGG TTTTTGATAA TCTCCCTCCG GTGAACGGTG CCTCTAAAGA CGCGCCTGAA
GCGGCTCACT CCAAAGTACG TGATTATTTT CGCAGTTTAG CGATGGAAGG GCGTCATAAG
AGCGCAGCTC GTGTGACCGA TCCTGAGTTG GATGCTAAGC AAGTTAAAGT GCTACAGCTG
ATCAACGCCC ACCGTTTCCG TGGTCACCAA GGTGCTAACC TTGACCCGTT AGAATTGTGG
AAACGTGAAC CTGTTGCCGA TTTAGATCCC GCATTCCACG GTCTGACCAA AGAAGACATG
GAGCGTGAGT TCAATACTGG CTCGTTCGCC CACGGCGGCG AAACCATGAA GTTGGCGGAT
TTAGTCAAAG CGCTTAAAGC CACATATTGT GGTTCTATCG GCGCCGAATA CATGCATATT
ACCGACACCG ATGAAAAGCG TTGGATCCAA CAACGTCTCG AACCATCCTT AGGTAAAGCC
AACTACGATA AAAGCGTTAA GACCCGCATT CTCGAAGGCC TAAATGCTGC TGAAGGCATT
GAAAAATATT TAGGCGCTAA ATTCCCTGGT GCAAAACGCT TCTCTTTAGA AGGTGGCGAT
GCGTTAGTGC CAATGATGAG AGAAATCATT TATCGCGCAG GCGAAGCTGG CACTAAAGAA
ATCGTGGTCG GTATGGCTCA CCGTGGTCGT TTAAACGTCC TCGTGAACGT ATTAGGTAAG
CGTCCTGCTG AGCTGTTTGA CGAGTTCGCG GGTAAGCATG CTGATACCCA CGGTTCTGGT
GACGTTAAGT ACCACCAAGG TTTCTCATCT GATTTTGAAA CACCAGGTGG CAATGTGCAT
TTGGCGCTGG CTTTCAACCC GTCTCACCTT GAAATCGTTA ATCCTGTGGT TATGGGGTCT
GTACGTGCTC GTCAAGACCG TCGTGGTTGC AAAGATGGTT TACAGGTGAT GCCTATCACT
ATCCACGGCG ATTCTGCTAT TACTGGTCAA GGTATCGTAC AAGAGACATT CAACATGTCT
CAAACCCGTG GCTTTAAAGT GGGTGGTAGT ATCCGTATCG TTGTGAACAA CCAAGTGGGC
TTTACCACTT CAAATCATTA CGATGTGCGT TCAACTGAAT ACTGTACTGA TATCGCGAAG
ATGGTACAGG CACCGATTTT CCACGTAAAT TCAGACGATC CAGAAGCCGT CGCCTTTGTT
GCGCAGCTTG CCGTTGATTA CCGTAACGAG TTTAAACGTG ATGTGGTGAT CGACTTAGTG
TGTTATCGCC GTCATGGCCA TAACGAAGCT GATGAGCCAA GCGCAACTCA GCCACTAATG
TATGCCAAGA TCAAGAAACA CCCAACGCCA CGTAAGATTT ACGCTGACAA ACTGATCGCA
GAAAACACCA TTGCTGCCGA TGACGTGACC GGCATGATCA ACACTTACCG CGATGCTTTA
GACCAAGGTG ATTGCGTAGT GAAAGAATGG CGTCCAATGA CACTGCATAC CGTAGATTGG
ACTCCTTATA TTGGTCGCGA ATGGGATGAA GCCTATGACG CTTCACTGCC TATCGAACGT
TTGCAGAAAC TAGCCGATAA GCTGAGCTAC GTGCCTGAAA GCCATTCTCT GCAATCCCGT
GTTGCTAAGA TTTATAGTGA CCGTGTTGCA ATGGCAAAAG GGGAGAAGCC ACTTGATTGG
GGCTTTGCTG AAACCTTAGC TTACGCAACG ATTCTTGAAG ATAAGCAACG TGTTCGCATT
ACTGGTCAAG ACTCTGGCCG CGGGACTTTC TTCCACCGTC ATGCGGTTCT GCATAACCAA
AACGATGCGA CTACGTATTT ACCACTGCGT AATATTAGCG ATGGTCAAGG TCCAATCGAC
ATTACTGACT CAGTACTCTC TGAAGCCTCA GTATTGGCAT TCGAATATGG TTACGCAACG
GCAGAGCCTA GTGGTTTAGC CATTTGGGAA GCGCAATTTG GTGACTTTGC TAACTGTGCA
CAGGTCGTGA TTGACCAGTT CTTATCTTCT GGTGAGCAAA AGTGGGGCCG TTTATGCGGT
CTGACCATGC TGTTGCCTCA CGGCTACGAA GGTCAAGGTC CAGAGCACTC AAGCGCCCGT
TTAGAGCGTT TCTTACAGCT TTGTGCTAAC CACAATATGC AAGTGTGTGT ACCATCAACG
CCTGCACAGG TTTACCACAT GCTGCGTCGC CAAGTGGTGC GCCCAATGCG CCGTCCACTG
GTGGTGATGT CACCTAAGTC ATTGCTACGT CACCCATTAG CGGTTTCTAG CATGGACGAA
TTGGCCAATG GCAGCTTCCA AAACGTGATT GGTGAAATCG ATACGTTAGA AGCGAGCAAG
GTCGATCGCG TGGTGTTCTG TAGCGGTAAG GTGTACTTCG AACTACTCGA AAAACGCCGT
AAAGAAAACA TCAATAACAT CGCAATTATC CGTGTCGAAC AGTTATATCC GTTCCCACAT
GAAGAAATGG TTGCAGCATT AGCTGACTAC CAACATGTGA AGGATTTTGT TTGGTGTCAG
GAAGAGCCGC AAAACCAAGG TGCTTGGTAC TCTAGCCAAC ATCACTTTTG GGCTGCTATC
CCTGCGGGAG CAAAACTCAC TTACGCTGGC CGTGAAGCGT CTGCTGCACC AGCTTGTGGT
TACCCTGAGT TGCATGCTCA CCAACAAGAA TCTTTAGTGA ACAGTGCCTT AAAGCTCTAA
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| Protein sequence | MHQGIMKAWL ESSHLSGANS TYVEEMYEAY QEDPQSVSDD WRAVFDNLPP VNGASKDAPE
AAHSKVRDYF RSLAMEGRHK SAARVTDPEL DAKQVKVLQL INAHRFRGHQ GANLDPLELW
KREPVADLDP AFHGLTKEDM EREFNTGSFA HGGETMKLAD LVKALKATYC GSIGAEYMHI
TDTDEKRWIQ QRLEPSLGKA NYDKSVKTRI LEGLNAAEGI EKYLGAKFPG AKRFSLEGGD
ALVPMMREII YRAGEAGTKE IVVGMAHRGR LNVLVNVLGK RPAELFDEFA GKHADTHGSG
DVKYHQGFSS DFETPGGNVH LALAFNPSHL EIVNPVVMGS VRARQDRRGC KDGLQVMPIT
IHGDSAITGQ GIVQETFNMS QTRGFKVGGS IRIVVNNQVG FTTSNHYDVR STEYCTDIAK
MVQAPIFHVN SDDPEAVAFV AQLAVDYRNE FKRDVVIDLV CYRRHGHNEA DEPSATQPLM
YAKIKKHPTP RKIYADKLIA ENTIAADDVT GMINTYRDAL DQGDCVVKEW RPMTLHTVDW
TPYIGREWDE AYDASLPIER LQKLADKLSY VPESHSLQSR VAKIYSDRVA MAKGEKPLDW
GFAETLAYAT ILEDKQRVRI TGQDSGRGTF FHRHAVLHNQ NDATTYLPLR NISDGQGPID
ITDSVLSEAS VLAFEYGYAT AEPSGLAIWE AQFGDFANCA QVVIDQFLSS GEQKWGRLCG
LTMLLPHGYE GQGPEHSSAR LERFLQLCAN HNMQVCVPST PAQVYHMLRR QVVRPMRRPL
VVMSPKSLLR HPLAVSSMDE LANGSFQNVI GEIDTLEASK VDRVVFCSGK VYFELLEKRR
KENINNIAII RVEQLYPFPH EEMVAALADY QHVKDFVWCQ EEPQNQGAWY SSQHHFWAAI
PAGAKLTYAG REASAAPACG YPELHAHQQE SLVNSALKL
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