| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1929 |
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| Symbol | sdhB |
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| ID | 1169691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2033396 |
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| End bp | 2034103 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637343814 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | NP_717536 |
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| Protein GI | 24373493 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTGG AATTTGCAGT TTATCGCTAC AATCCTGATG TAGATACAAA ACCTTACATG
CAGGATTACA GCCTTGAAGT CGCTGATGGC ACTGACATGA TGGTGCTCGA TGCACTTATC
AAGTTAAAAG AAAAAGATCC AACCTTAGTG TTCCGTCGCT CTTGCCGTGA AGGTGTTTGC
GGTAGCGATG GTCTGAACAT GAACGGTAAA AATGGTCTGG CTTGTATTAC CCCAGTCTCT
ACCTTCAAAG GTAAGAAATT GGAAATTCGT CCACTGCCAG GTATGCCAGT CGTTCGTGAC
TTAGTGGTTG ATTTAACTCA GTTCTATAAG CAATACGAGA AGATCAAACC CTTCCTTATC
AATGATGATA AGCAGCCAGC TCGTGAACAT TTACAGTCAC CTGAACAACG TGCGCATTTA
GATGGTCTGT ACGAATGTAT TATGTGTGCC TGTTGTTCAA CGGCTTGCCC ATCATTCTGG
TGGAATCCTG ATAAGTTTAT CGGTCCTAGC GGTCTGCTAC ACGCTTACCG TTTCTTGATC
GACAGCCGCG ATACAGCAAC AGAAGAACGT CTTTCTGAGC TGGACGACGC CTACAGCGTG
TTCCGTTGCC ATGGCATCAT GAACTGCGTT GACGTATGTC CAAAGGGACT TAATCCGACT
AAAGCAATTG GTCATATTAA GTCAATGCTG CTTAAGCGAG CTGTGTAA
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| Protein sequence | MKLEFAVYRY NPDVDTKPYM QDYSLEVADG TDMMVLDALI KLKEKDPTLV FRRSCREGVC
GSDGLNMNGK NGLACITPVS TFKGKKLEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPFLI
NDDKQPAREH LQSPEQRAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI
DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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