| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1924 |
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| Symbol | |
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| ID | 1169685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2024538 |
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| End bp | 2027813 |
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| Gene Length | 3276 bp |
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| Protein Length | 1091 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343808 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_717531 |
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| Protein GI | 24373488 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATCA TCAGCACCTC TGTTAAACGG CCAGTCACGG TATGGATGTT CATGCTGGCC
ATTATGTTAT TTGGTATGGT GGGATTTTCA CGCTTAGCGG TCAAACTCCT TCCCGATTTA
AGCTATCCCA CCCTGACGAT CCGCACCATG TACGACGGCG CGGCCCCCGT TGAAGTTGAG
CAACTTGTCT CTAAACCGAT TGAAGAAGCC GTCGGCGTGG TTAAAGGTTT ACGTAAAATC
AGCTCGATTT CTCGCTCAGG CATGTCAGAT GTGGTGCTCG AGTTTGAATG GGGCACCACC
ATGGATATGG CGAGCTTAGA TGTACGTGAA AAGCTCGATA CTATCGCCCT GCCGCTGGAT
GTGAAAAAGC CCCTGTTGCT GCGCTTTAAC CCTAACCTTG ATCCTATTAT GCGCCTCGCG
TTGTCGGTAC CTAATGCCTC TGAAGCCGAG CTCAAGCAGA TGCGTACCTA CGCTGAAGAA
GAGCTTAAAC GCCGTTTAGA GGCACTCTCA GGCGTGGCTG CGGTGCGTTT ATCCGGCGGT
TTAGAGCAAG AAGTTCATAT TCAGCTTAAT CAAGAAAAAC TGTCGCAACT CAATTTGAAC
GCGGATGACA TTAAGCGTCG TATCAATGAG GAAAACATCA ATCTCTCGGC AGGTAAAGTT
ATCCAGGGGG ATCGCGAATA TCTGGTACGT ACCCTTAATC AGTTCAATTC CTTAGATGAA
CTAGGGCAAG TTATCGTCTA TCGCGATGCA CAAACCTTAG TGCGCCTGTT TGAAGTCGCC
ACCATTACCG ATGCCTATAA AGAGCGCAGC GATATCACTC GCATTGGTAG TCAGGAATCG
ATTGAACTGG CTATCTATAA AGAAGGCGAC GCTAACACTG TCGCGGTCGC CAAAAAATTG
CGTGATGAGC TGGTGAAGAT CAACAAAGAT CCTCAGCAAA ACAAACTGGA AGTGATTTAC
GATCAATCAG AATTTATTGA GAGTGCCGTC AGTGAAGTCA CCTCTTCAGC GCTCATGGGC
AGTGTGTTAG CCATGCTGGT GATTTATTTG TTCCTACGCA ATATTATCCC GACACTGATT
ATCTCTATCT CAATCCCCTT CTCAGTGATT GCAACGTTTA ACATGATGTA CTTTGCCGAT
ATCAGCTTAA ACATCATGTC ATTAGGCGGT ATTGCACTGG CGATTGGTCT GTTGGTTGAC
AACGCGATTG TAGTACTCGA AAACATCGAC CGCTGCCGCA GTGAAGGTAT GAGTAAATTG
GATGCCGCGG TTACGGGGAC TAAGGAGGTT GCAGGCGCGA TTTTCGCCTC GACGATGACA
ACGCTTGCGG TGTTTGTTCC CTTAGTATTT GTCGATGGGA TTGCCGGTGC CCTCTTTTCA
GATCAAGCTT TAACAGTGAC CTTTGCTCTC TTGGCCTCCT TGCTGGTTGC GTTAACCTCG
ATTCCAATGC TGGCCTCACG GGAAGGATTT AAGATCTTGC CTGAGCTTAT GAAGAAAACC
CCCAAGGAGA AACCAACCAC TAAACTTGGT AAATTAAAAC ACTATAGTGC GACCGTGTTT
TCCTTCCCAA TTGTTTTGTT ATTTAATTAC TTGCCGAGTG CCTTACTCAC CTTTGTGTTA
ATTATTGGCC GCTTCTTCTC TTGGCTGCTT GGTTTGATAA TGCGCCCTTT AAGCAGTGGC
TTTAATTTTG TGTACCATAG TACTGAGTCC ATCTATCACA AGCTCCTTGC AATAGCGCTA
CGTAAACAAC TCGCTACCTT ACTACTGACA ACTGGGATCA CAGGCGCTTG TATTAGCCTG
CTTCCTCGTC TGGGTATGGA ATTAATTCCA CCGATGAACC AAGGGGAATT CTATGTTGAG
ATCTTGTTAC CTCCTGGTAC CGCCGTGGGT GAAACCGATA GGATACTGCA GCAGCTCGCG
TTATCGATTA AAGACAGGCC CGAAGTCAAA CATGCCTATA GCCAAGCCGG TAGCGGTGGT
TTAATGACCT CAGATACCGC CCGCGGCGGT GAGAATTGGG GGCGTTTACA GGTCGAGCTT
GTGGATCACA GCGCCTATCA TCAAGTGACT CAAGTACTGC GAGATACCGC TCGACGCATT
CCAGCACTTG AAGCCAAAAT CGAGCAACCA GAACTCTTTA GCTTTAAAAC GCCACTTGAA
ATTGAGCTAA CAGGTTACGA TTTAGCCTTA CTAAAACGCA GTGCTGACAG CTTAGTTAAC
GCACTTTCAG CTTCTGATCG CTTTGCCGAT ATCAATACCA GTCTGCGTGA TGGTCAGCCA
GAGCTGAGCA TCCGTTTCGA CCATGCTCGT TTAGCGGCAT TAGGTATGGA TGCCCCCACG
GTTGCAAATC GCATTGCACA ACGCGTTGGT GGCACTGTCG CCAGTCAATA CACGGTTCGT
GATCGTAAGA TTGATATCCT CGTTCGGAGT CAACTGGATG AGCGGGACCA AATCAGCGAT
ATCGATACTT TAATCATTAA CCCTGATAGC TCTCAGCCGA TTGCTCTTAG CGCGGTGGCC
GAAGTATCAC TGCAATTAGG CCCATCGGCG ATAAATCGTA TCAGCCAACA AAGGGTTGCC
TTAGTGTCGG CCAACCTTGC CTACGGCGAT TTAAGTGATG CAGTGGCCGA TGCGCAGCAA
ATTCTAGCGG CACAGGTGTT GCCAACATCA GTTCAAGCCC GCTTTGGTGG TCAGAATGAA
GAAATGGAAC ATTCATTCCA ATCACTTAAA ATTGCGTTGA TCCTTGCTGT GTTCTTAGTT
TACTTAGTGA TGGCAAGCCA ATTTGAATCA TTGCTGCATC CATTACTGAT TTTAGTCGCC
GTGCCAATGG CACTCGCGGG TAGCGTTCTT GGCCTATATA TCACCCAAAC CCATTTGAGT
GTGGTGGTAT TTATTGGCCT GATTATGCTC GCGGGGATAG TTGTCAATAA CGCCATCGTG
TTAGTGGATA GGATAAATCA GTTACGTTCA GAGGGCGTGG AAAAGCTTGA AGCCATTAGA
GTTGCGGCCA AATCCCGTCT TCGCCCGATT ATGATGACGA CCCTCACCAC AGTATTAGGT
CTACTGCCCA TGGCGTTAGG GCTAGGCGAT GGTGCTGAAG TCCGAGCACC AATGGCGATC
ACAGTTATCT TTGGTCTAAG CCTATCGACG CTTTTGACCC TGATTGTGAT CCCTGTGCTC
TATGCCATGT TTGACCGTAA AAAGTTTGAT CATACAAACA TTGTTTCTAC AGCAGAGCAA
GACGCAACAA CGCTAACTGT GGAGACTCGC CCATGA
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| Protein sequence | MSIISTSVKR PVTVWMFMLA IMLFGMVGFS RLAVKLLPDL SYPTLTIRTM YDGAAPVEVE
QLVSKPIEEA VGVVKGLRKI SSISRSGMSD VVLEFEWGTT MDMASLDVRE KLDTIALPLD
VKKPLLLRFN PNLDPIMRLA LSVPNASEAE LKQMRTYAEE ELKRRLEALS GVAAVRLSGG
LEQEVHIQLN QEKLSQLNLN ADDIKRRINE ENINLSAGKV IQGDREYLVR TLNQFNSLDE
LGQVIVYRDA QTLVRLFEVA TITDAYKERS DITRIGSQES IELAIYKEGD ANTVAVAKKL
RDELVKINKD PQQNKLEVIY DQSEFIESAV SEVTSSALMG SVLAMLVIYL FLRNIIPTLI
ISISIPFSVI ATFNMMYFAD ISLNIMSLGG IALAIGLLVD NAIVVLENID RCRSEGMSKL
DAAVTGTKEV AGAIFASTMT TLAVFVPLVF VDGIAGALFS DQALTVTFAL LASLLVALTS
IPMLASREGF KILPELMKKT PKEKPTTKLG KLKHYSATVF SFPIVLLFNY LPSALLTFVL
IIGRFFSWLL GLIMRPLSSG FNFVYHSTES IYHKLLAIAL RKQLATLLLT TGITGACISL
LPRLGMELIP PMNQGEFYVE ILLPPGTAVG ETDRILQQLA LSIKDRPEVK HAYSQAGSGG
LMTSDTARGG ENWGRLQVEL VDHSAYHQVT QVLRDTARRI PALEAKIEQP ELFSFKTPLE
IELTGYDLAL LKRSADSLVN ALSASDRFAD INTSLRDGQP ELSIRFDHAR LAALGMDAPT
VANRIAQRVG GTVASQYTVR DRKIDILVRS QLDERDQISD IDTLIINPDS SQPIALSAVA
EVSLQLGPSA INRISQQRVA LVSANLAYGD LSDAVADAQQ ILAAQVLPTS VQARFGGQNE
EMEHSFQSLK IALILAVFLV YLVMASQFES LLHPLLILVA VPMALAGSVL GLYITQTHLS
VVVFIGLIML AGIVVNNAIV LVDRINQLRS EGVEKLEAIR VAAKSRLRPI MMTTLTTVLG
LLPMALGLGD GAEVRAPMAI TVIFGLSLST LLTLIVIPVL YAMFDRKKFD HTNIVSTAEQ
DATTLTVETR P
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