| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1918 |
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| Symbol | |
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| ID | 1169681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2018850 |
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| End bp | 2020355 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343804 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_717525 |
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| Protein GI | 24373482 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG CTAAGTTTGT TGAAGGTTCG ATTCTTCGCC ATATTCTTGT GATGAGTTCG
ACCGCCGCCG TGGGGATTTC AGCATTATTT GTGGTCGATT TACTCGATAT TTTCTTCTTA
AGCTTATTGG GCGAACATGA ATTAGCCGCA GCAGTAGGTT ATGCGGGCAG TATTTCGTTT
TTTACCACCT TAATTGGTAT CGGCCTCTCC ATTGCCCTCG GGGCGTTGGT GTCTCGCTCT
ATCGGCGCCA AGGATGTCGA GTTAGCTAAA CGCCTATTGC TCAACAGTGC GGTGGTGACC
ACGTTAATCA GTGTGTTCGT AAGCATTGTA GTGACGACTT TTATTCCTGA ATTAGTCACG
CTTGTTGGTG CGAGCGGTCA TACTGCTGAG CTTGCAGAGA GTTATCTGTA TATTCTAGTG
CCTTCATTAC CTTTTATCTG CCTTGCGATG GCCCTTGGCG GCGCGCTGCG ATCAGTTGGG
GATGCAAAGC TTTCGATGAT GTCAACCCTC GCGGGTGGCG GCGTTAATGC CGTGCTTGAT
CCTATTTTTA TCTTCTTGTT TGCCATGGGG ATTGAAGGGG CTGCATTGGC ATCGGTCTTG
GCGCGGATTA CGGTATTTGT CATTGCTGGG CGTGGTGTTA TGGTGAAACA TCAACTCCTC
GGCAAGTTTA ATCGCAGCGA TTTTAAGGCC GATCTTAAAC CGATTTTTGC GATTGCAGGA
CCTGCCATTC TCACTAACAT TGCCACGCCA ATTGGCAATG CGTTTGTTAC TCGGGCGATT
GCGGATTTTG GGGATGCCTA CGTGGCGGGC TGGGCGGTGC TTGGCAGGTT GGTGCCTGTT
ACCTTTGGGA TGATTTTTGC CTTATCAGGT GCCATTGGGC CTATTGTTGG GCAAAACTTT
GGGGCAGGAC GATTCGATAG GGTGCGCGAA AGTTTAACGA AGGCCATTCA ATTTTGTACC
TTGTATGTGG TGGTGATGTC GTTACTTTTG TTCTTACTTA AATCGCAGAT CGTCAGTTTG
TTTGATATGA AGGGCGATAG TGCGGCGCTT ATTGAGTTTT TCTGCAGCTA TATTGCGGTG
TTTTTTATCT TCTCAGGCAT TTTATTTGTC GCAAACGCTT CCTTTAATAA TTTGGGTAAG
GCCAAATATT CCACCTTGTT TAATGTGGGC AAGGCGACTT TAGGTACTGT CCCCTTTGTC
TATGTTGGCG CACAGTTGGG CGGGGTTTAC GGTGTGCTTA TCGGCCAGGT CATTGGTTCT
ATTCTGTTCG GTGTTGTAGG TGTATGGGTT GCCTATCGCT TAGTCGACAA GGTTGTGTTG
ACATCGACCG GGCATGGTGT TGTTAGTTTA GCAACCGATG CGGACGAATT GATGACTGAT
ACGGTGGCTC CGAGTGCGAC TAGCCCACTT TCATCCTCCT GCGCGCAAAT GGCGCAATTA
ACGGAAGAGC AAGAAATGGA GCCTGTTTTA CCCTTAATAG GGCAACAGGA TAATTCGAGG
CGTTAA
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| Protein sequence | MTQAKFVEGS ILRHILVMSS TAAVGISALF VVDLLDIFFL SLLGEHELAA AVGYAGSISF
FTTLIGIGLS IALGALVSRS IGAKDVELAK RLLLNSAVVT TLISVFVSIV VTTFIPELVT
LVGASGHTAE LAESYLYILV PSLPFICLAM ALGGALRSVG DAKLSMMSTL AGGGVNAVLD
PIFIFLFAMG IEGAALASVL ARITVFVIAG RGVMVKHQLL GKFNRSDFKA DLKPIFAIAG
PAILTNIATP IGNAFVTRAI ADFGDAYVAG WAVLGRLVPV TFGMIFALSG AIGPIVGQNF
GAGRFDRVRE SLTKAIQFCT LYVVVMSLLL FLLKSQIVSL FDMKGDSAAL IEFFCSYIAV
FFIFSGILFV ANASFNNLGK AKYSTLFNVG KATLGTVPFV YVGAQLGGVY GVLIGQVIGS
ILFGVVGVWV AYRLVDKVVL TSTGHGVVSL ATDADELMTD TVAPSATSPL SSSCAQMAQL
TEEQEMEPVL PLIGQQDNSR R
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