| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1915 |
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| Symbol | |
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| ID | 1169678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2012448 |
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| End bp | 2016350 |
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| Gene Length | 3903 bp |
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| Protein Length | 1300 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343801 |
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| Product | serine protease |
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| Protein accession | NP_717522 |
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| Protein GI | 24373479 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA AAATTGCATT AGCAGTGTCA ATGGCACTGC TGTCATCTGC AGCAAATGCT
CAAACCGTAT TATCTCACAG CGGTGAAACT GTACAGTTTG ATATTAGTCC TGAATTAGCG
GCAAGTACTG TTCGCGGCAG TTTATCCATC GAAGCTAACG AGGTTAAATT TGTCCCGGAA
GTGGATTTAG ATGATAGTGA ATACACTTAT ATTGTGCGTT TACGTGACAG TGCTGCAGCA
AATTACCAAG GTGAAATTGC TGGCTTTAAA GCAACGAGCC CGCAACACAC TAGTAGCCGT
ATTTCGAGTC AATTCTCTGG TAATGTAAAG CTGGATGCAG CTAAGCCTGA AGTTAAAAAC
TATGTTAGTT ATCTTAAGGT TAAGCAAAAT CGATTTTTAA CGAATGCCAG TGCTGCGATA
GGTAGTCCCA TCGAAGCATT AACCACCTAT CAGTATGCGC TTAATGGTAT GGCGATTCGC
ATGACGCAGG CGCAGGCGAT CAAAATGGCT GAGCTGCCAG ACGTCGTCTT TATTGAGCGT
GAGCGTATTG AACAGTTAGA AACCGATGTA AGTCAATCGC TTATTGGTTC ACCTAAAATA
TGGGATGGCA GTGCCACTGG CACAAAGGCG ATGGGCGAAG GGGTGATAGT CGGGATTATT
GATTCTGGCA TTAACTCTGA TCACGCTTCC TTTGCCGATA TTGGTGGCGA TGGTTATGAC
CACAGTAATC CGCTAGGTCA AGGTATCTAT ATCGGTGATT GTAAAACTGA TTTTACCAGC
ATGTGTAATG ACAAATTGAT TGGTGTTCGC AGCTATTCTG AGATCACTAA CAATTATGAT
GATGCAAAAG TCTTTGGTGA TAAACCACCG GCTAAAAATG GTGAAGACTA CGGTGGACAT
GGTTCCCATG TTGCGAGCAC CGCCGCTGGT AATATTCTGT TAAATGTCCC CTATGTACAA
GGTGAAGCCG GAAAGCTCGA AGCTGAGGGG ATTCCAACCG ATATTAAATT TGCGCAAATA
TCCGGTGTGG CACCCCATGC CAATATTATT GCCTATCAAA TTTGTAATCC TGGTAATGCA
GGAGACACCT ATTCTGGTTG CCCAACTGCA CCGATATTAA AAGCGATTGA TGATTCGATT
AAAGATGGCG TCGATGTGCT GAACTTTTCT ATCAGTGGTG GCGGTAATCC ATGGAATAGT
GCTACAGAGC AAGGTTTTTT AGCTGCACGT AATGCGGGGA TTTTCACGGC AGTTGCTGCT
GGCAACACTC GCCCTGCTAC TGCAACCAGT GCAGCTATTA CCCAAACACC ATACTCAACA
CCGAAAAATG CTCCTTGGTA TACCTCGGTG GCAAACTCCA CTCACGATCG AGATATTGTG
AGCGCAGTTG AGTTTAATGG TAAAAATTAT AGTTTTACGG CTGGGTCTGG CCCTGCTTTG
ACGGAAGTCT TAAGTGGGAT CCCTGTTTAT GCGGGCAGTC TCGATTCGAC GAATTTTGAA
GCTTGTAAAG CCTTTGCAAC GGATGCCTTC AAAGGCAAAA TTGCAGTGAT AAAGCGCGGT
GGTTGTACAT TTGATGTTAA AGTTGCAGCA GCATTGAACG CCGGCGCTAA AGGTGTTGTT
GTGTTTAACC GAGAAGGTGA AGGCAACACA CGTTTAAGTA TGTCAGGTTT AGAGAAATTC
AATATTCCAG CGGTATTTAT CGGTAACACC GATGGTCTTG CACTCATTGA TGCGATTACG
GCCAATCCGA GTCTTGAATT GGTGATTTCA CCTTTGCCTA AAGTGGTAAC GAAGGAAGCT
GATGTATTAA ACGCTAGCTC ACTTATCGGT CCCAATGCTA CAAATGATGT ATTAGTGCCC
TTCGTTGCGG CACCTGGTAC AGATATTTAT GCAGCCTATG CTGATCAACA ATTTGGTCAT
GACAAAACCG GCACTGATCC AGCTGATTTT ACCTTAATGT CGGGCACCTC CATGGCCAGT
CCCCATGTGG CAGGCGCTGG AGCGTTATTA AAATCACTTC ACAAGGATTG GACACCGGAT
CAAATCCGCT CAGCATTAAT GTTAACCGCT ACCACAGCTC AGGCGATGAA AAAAGCCGAT
GCTAAGACTA TTGCCGATCC TTTCGATGTG GGAGCTGGCC GTATTCGCGT TGATTTAGCA
GCCAAAACAG GCTTGGTGAT GGATGAATTG GGACTAAGTT ACGACATTGC CAATCCTGCG
AAGGGCGGTG ATCCTCGTAA GTTAAACATC CCAAGTATGG CGGATTCACG CTGTATCGAT
AATTGTACTT GGACTCGCAC AGTCACAGCT ACCGCTGACG GCACGTGGAC AGCTAAAGGG
GTTGCTGTGA CCGATAAACT GGTGGTAACT GCATCGCCAG AGCGCTTTAG TCTGAAAAAA
GGGCAAAGCC AAGTCATTAC CGTGACTGCC AATGTGGCTG AGGTTGGCGA AAATTGGGGC
TTTGGTAATT TAGTGCTTGA ATCTGATGCC TTCCCAACGG CATCGATGCC AATCGCAGCC
AAAATTGCCA AGCGTGATTT ACCTACAGCA TTGAATATCC TTGCCGCTCG CGATGCTGAT
GAACGCAATT TTAACCACCT AAAGGCTATT GATATGCCTG GTGTTTCGGC AAAAGTGACC
GCATTGGCGT TAAGCGATAC TCTTGAGTCC CGTGTGAAGC AGGATTCTGA TAACAACAGT
GCATTTGACA ATTTGGAAGA TGGTGTCAAG GTCTTTACCT TTAATGTTGA AGATAACGCC
TTGTTTTTCA ATGTATCAAT CGGTGAGACT ACATCTCCTG ACTTAGATAT GTTTGTGTTT
CTAGACAAGA AAGATGGCAG TAAGTTGTCA CGGGTTGGCT CTTCTGCTTT AAATGGGTCT
AAGGAACGTG TCTCCATTAA AAATCCGGTT AAGGGACAAT ATATTGTTAT CGTGCAAAAC
TATGAGGCTT CAGCAGCCAA TGCTGAGGAT ACTTTTAGCC TCAAACAGGT GACACTGTAC
AATGGGGCGG GCGATAACTT GACGGCGGCC CTTTCGGGTG ACAGTAAGGA TTTCAGTATC
AACCTAGCTT GGAAGCAAGC TATGTTAGTC GGCAGCGATG GTTTGGCTCA ATTAACATTA
ACCAGCAGCG ACGAGAAAGT GGCACCGGTT GCGATTCCGT TGTTGTTTGA GCGCACCATC
GATGACGTGC TGCCACCTTT GGGAAGTACG ATATCCAGTG AATTAACACC TGGTGTACCT
AAGGTGATAA AGACTCGGAT TGCTGCCAAT AGCACACCTG AGATGCGGGT TTACACCCTT
GAAGCACAGA TCCCTGAAGG CCATGAAGTG GCCAATATAA GCCATAAAGG TGCACATCAG
GCGAATAAGA TTAGCTGGAC AATTGATATG GCTTCTGCGG CCGCCGCTCA AGATATTACT
TTTGAGCTTG TGCCACGTAA GGCAAGTCAA GAAAACCAAT TGATCTTAAC TAACAAAGTG
AATAACGGTA GCGCTGAAAT CTTAAAGCAG GAATACCAAT TTGATGTGAC TGAAGTGGCG
CCAGTTGCCA TGATTGAAGC GCCAGCGTCA GTTCAAGAAG GTAAGCCTTT GTTTATTGAT
GCCAGTAAAT CCGCTGATGC CAATAATGAC CCATTAACTT ACAAATGGAC TCAGTTAGGC
GGCGCGAGCT TTAATTTTGA CCCCACCGCG GCCAAATTAA ACTTAGTTGC ACCTAATGTG
GATGGCGCTG CGCAAACGGT GTCTTTCCAA CTGACGGTAT CGGATAATCA TGGTAATCGC
GATTCGAGTG TCGTGTCTGT CTCTATTACC GATACGCCAC CGAAGAAAGA TGACGGTGGT
GCCTTAGGTT GGTTAAGTTT ACTTCTGCTG CCATTTGCCT TTGGTCGCCG TAAGCTGCGC
TAA
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| Protein sequence | MKTKIALAVS MALLSSAANA QTVLSHSGET VQFDISPELA ASTVRGSLSI EANEVKFVPE
VDLDDSEYTY IVRLRDSAAA NYQGEIAGFK ATSPQHTSSR ISSQFSGNVK LDAAKPEVKN
YVSYLKVKQN RFLTNASAAI GSPIEALTTY QYALNGMAIR MTQAQAIKMA ELPDVVFIER
ERIEQLETDV SQSLIGSPKI WDGSATGTKA MGEGVIVGII DSGINSDHAS FADIGGDGYD
HSNPLGQGIY IGDCKTDFTS MCNDKLIGVR SYSEITNNYD DAKVFGDKPP AKNGEDYGGH
GSHVASTAAG NILLNVPYVQ GEAGKLEAEG IPTDIKFAQI SGVAPHANII AYQICNPGNA
GDTYSGCPTA PILKAIDDSI KDGVDVLNFS ISGGGNPWNS ATEQGFLAAR NAGIFTAVAA
GNTRPATATS AAITQTPYST PKNAPWYTSV ANSTHDRDIV SAVEFNGKNY SFTAGSGPAL
TEVLSGIPVY AGSLDSTNFE ACKAFATDAF KGKIAVIKRG GCTFDVKVAA ALNAGAKGVV
VFNREGEGNT RLSMSGLEKF NIPAVFIGNT DGLALIDAIT ANPSLELVIS PLPKVVTKEA
DVLNASSLIG PNATNDVLVP FVAAPGTDIY AAYADQQFGH DKTGTDPADF TLMSGTSMAS
PHVAGAGALL KSLHKDWTPD QIRSALMLTA TTAQAMKKAD AKTIADPFDV GAGRIRVDLA
AKTGLVMDEL GLSYDIANPA KGGDPRKLNI PSMADSRCID NCTWTRTVTA TADGTWTAKG
VAVTDKLVVT ASPERFSLKK GQSQVITVTA NVAEVGENWG FGNLVLESDA FPTASMPIAA
KIAKRDLPTA LNILAARDAD ERNFNHLKAI DMPGVSAKVT ALALSDTLES RVKQDSDNNS
AFDNLEDGVK VFTFNVEDNA LFFNVSIGET TSPDLDMFVF LDKKDGSKLS RVGSSALNGS
KERVSIKNPV KGQYIVIVQN YEASAANAED TFSLKQVTLY NGAGDNLTAA LSGDSKDFSI
NLAWKQAMLV GSDGLAQLTL TSSDEKVAPV AIPLLFERTI DDVLPPLGST ISSELTPGVP
KVIKTRIAAN STPEMRVYTL EAQIPEGHEV ANISHKGAHQ ANKISWTIDM ASAAAAQDIT
FELVPRKASQ ENQLILTNKV NNGSAEILKQ EYQFDVTEVA PVAMIEAPAS VQEGKPLFID
ASKSADANND PLTYKWTQLG GASFNFDPTA AKLNLVAPNV DGAAQTVSFQ LTVSDNHGNR
DSSVVSVSIT DTPPKKDDGG ALGWLSLLLL PFAFGRRKLR
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