Gene SO_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1909 
Symbol 
ID1169673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2007406 
End bp2008215 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content48% 
IMG OID637343796 
Producthypothetical protein 
Protein accessionNP_717516 
Protein GI24373473 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACACG TAAATGTCAG TCTCATGCCG GTATTATTTG TTCCCCATGG CGGTGGGCCT 
TTGCCGCTAC TCAATGATGC TAATCATCAC CAGCTTAGGG ATTTTTTGTC TTCAGTCGGG
GGACAAATCC CAATGCCCAA AGCTATTTTA TTGATCACTG CCCATTGGGA GGAGGCGCAG
GTTACGCTGT CGAGTCATCC CCATCCTGGC ATGTTATTCG ATTATTATGG ATTTCCGCCT
GAGGCTTATA AACTCAGTTA TCCCGCGCCC GGCAACCCTG AACTCGCTGA AAAAATTGCG
AGCTTATTAA AGGCGAGTGG AATTGCAGTA AAACTCGATA ATCAGCGAGC ATTTGACCAC
GGAACCTTTG TACCACTTAA ATTGATGTAC CCTGAGGCAA ATATTCCTGT GGTGCAAATG
TCATTAGTGC AGCACCTTGA TCCTCGCGCT CATATTGCTA TCGGTGAGGC ACTCGCATCA
TTGCGGCAAC AAGGTGTGTT GATTGTTGGG TCGGGGATGT CGTTTCACAA TATGCGGGCA
TTTTTCTCAA GTGATCCTAA GGTGTTACCC CGCAGCCAAG AGTTTGATGA CTGGCTAACC
CAAGTGCTGA CGTTGGCGCC TCATCATGCT AAGTCGCAGT TAATTGAGTG GCAGTCAGCA
CCTGAGGCGC GTTTTAGTCA TCCAAGGGAA GAGCACTTGT TGCCTTTGCA TGTGTGTTTT
GGTGCGGCAA GTTCTGAGTC ACCTAAAGCA ATACAAGCGT TTAGCGGTGT GCTATTAAAC
ACGGCGATAT CCGGTTATCT CTGGCCATAA
 
Protein sequence
MAHVNVSLMP VLFVPHGGGP LPLLNDANHH QLRDFLSSVG GQIPMPKAIL LITAHWEEAQ 
VTLSSHPHPG MLFDYYGFPP EAYKLSYPAP GNPELAEKIA SLLKASGIAV KLDNQRAFDH
GTFVPLKLMY PEANIPVVQM SLVQHLDPRA HIAIGEALAS LRQQGVLIVG SGMSFHNMRA
FFSSDPKVLP RSQEFDDWLT QVLTLAPHHA KSQLIEWQSA PEARFSHPRE EHLLPLHVCF
GAASSESPKA IQAFSGVLLN TAISGYLWP