Gene SO_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1899 
Symbol 
ID1169664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1997128 
End bp1998843 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content43% 
IMG OID637343788 
Producthypothetical protein 
Protein accessionNP_717507 
Protein GI24373464 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTTT CTCGGAAAGA AATACTCATT ATGCGACGCA TCCATCATTT TACTCTCGGC 
TTATTACTGT TATTAAGCCC CGTAAGTACT GCCTGCTGGG CCTCGACGCC ACAACTCGAA
GCGTTACTCG AACCCCTGTC GCTCGGTGAA CGGGCTAAAG TCGATAACAC TCAAATTATC
AGTGCTAAGT TACTCTCACG GGTCTATCAA GTTCGCCATT ATCAAGCACT CTGGGAAGAT
AAAGACTATG CGGGCACTAT GCTTGATGTG ATTAAAAGAG CCGATGAGGA GGGGCTTGCA
AAGGAAGATT ACCACTATCC CAAGTTGGTC GAACTTTACC AACAACTCAG TGCATCGAAT
TGGCAGGATG AATACAAAAG CAGTATATTT GAAGTGCTCC TAAGCGATGG CATAATTACC
TATGCCATTC ATTTACTTAA TGGCAAAGTC AATCCCAGTA TGCTCGGCAA AACCTGGAAC
TATGATGAAG CCCATCTGGA TTTTGATACC ACATTAAAAC AGCTTGAAGA GCATATTAAA
GCACATACGG TTGCCGAGGC GATTAATGGA TTGGCGCCTA AGATTACCCC TTATCATCAG
CTAAAACAGT ATCTTGCCCA TTATAAAGAC TTGGCCGCCC GCTATCCTTT TACCACTATT
CCCTATACGG AAGTTATCAA ACCCGGTACT ACGTCACCAT CAATAAAAGG GATAGCAGCA
AGGCTGAAAG AACAGGGTTA TCTTGACGCT AACGCAACGG TGCAAGATGC CACACTCGTG
GCAAATGCTC CCTTACTCTA CGACAACATC CTTGAAGCCG CGATACGTCA ATTTCAAGCT
GATCATAGTC TTAAGGCGGA TGGAGTGATC GGTGCAGGCA CTATGGCCGC ATTGAATGTT
CCCTATGCAC AACGCGTTGA ACAGATCCGT ATCAACCTTG AGCGCGCCCG CTGGTTATCA
GCCAACTTAT CCGCAAACTA CCTAATCGTC AATTTGGCAG GCTATGAACT ATTACTTTTT
AAAGACAATA ACTTAAGCTG GAGAACCGAC ATTATCATCG GTAAAATTGA CTCAAAAACG
CCGCTGTTTA AATCAAAATT AAAATATGTA GTCGTGAATC CTACTTGGAC GGTACCAAAT
AGCATCTCCA CCGAAATCAT TAATCATCAG CGCAAAGATC CCGATTATCT GCACAAAAAG
CACTTTAAAG TGGTTGAAAG CTCAGGCACG CCCGTCGATG CCAGCGGTAT AGATTGGCAC
AGTATGACAC GCAAAAACTT CCCCTACTGG TTTGTGCAAG AGCCAGGAGC AGATAACTCA
CTTGGTTTAG TAAAATTTAT CTTCCCAAAC CAATATTCGA TTTATCTGCA TGATACTCCG
TCTAAAAATC TATTTGATAA AACAGACAGA GCCTTTAGCC ACGGCTGTAT TCGGGTGAAA
GATCCTTTAG TGCTCGCCGA TAAACTCCTG AGTGCTAATG CTAATTGGTC GAGCGAAACA
CTCAATAACA AACTTGCAGA GGGAAAAACA GAAAACCTGT TTTTAGATGA ACCCTTAGAT
ATTTTGATCA TGTATTGGAC GGCAACGATC AAAAATGGAA AAATCAAGTT TTACAATGAT
GTATATACAC GCGACCCCGT ACTTATCGAG GCATTAAACC GCCCAACCTA TGAAGGTGTG
TTAGCAGACG ACGGCTTGCT TAATACGCTG GACTAA
 
Protein sequence
MVFSRKEILI MRRIHHFTLG LLLLLSPVST ACWASTPQLE ALLEPLSLGE RAKVDNTQII 
SAKLLSRVYQ VRHYQALWED KDYAGTMLDV IKRADEEGLA KEDYHYPKLV ELYQQLSASN
WQDEYKSSIF EVLLSDGIIT YAIHLLNGKV NPSMLGKTWN YDEAHLDFDT TLKQLEEHIK
AHTVAEAING LAPKITPYHQ LKQYLAHYKD LAARYPFTTI PYTEVIKPGT TSPSIKGIAA
RLKEQGYLDA NATVQDATLV ANAPLLYDNI LEAAIRQFQA DHSLKADGVI GAGTMAALNV
PYAQRVEQIR INLERARWLS ANLSANYLIV NLAGYELLLF KDNNLSWRTD IIIGKIDSKT
PLFKSKLKYV VVNPTWTVPN SISTEIINHQ RKDPDYLHKK HFKVVESSGT PVDASGIDWH
SMTRKNFPYW FVQEPGADNS LGLVKFIFPN QYSIYLHDTP SKNLFDKTDR AFSHGCIRVK
DPLVLADKLL SANANWSSET LNNKLAEGKT ENLFLDEPLD ILIMYWTATI KNGKIKFYND
VYTRDPVLIE ALNRPTYEGV LADDGLLNTL D