Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1899 |
Symbol | |
ID | 1169664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1997128 |
End bp | 1998843 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637343788 |
Product | hypothetical protein |
Protein accession | NP_717507 |
Protein GI | 24373464 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTTTT CTCGGAAAGA AATACTCATT ATGCGACGCA TCCATCATTT TACTCTCGGC TTATTACTGT TATTAAGCCC CGTAAGTACT GCCTGCTGGG CCTCGACGCC ACAACTCGAA GCGTTACTCG AACCCCTGTC GCTCGGTGAA CGGGCTAAAG TCGATAACAC TCAAATTATC AGTGCTAAGT TACTCTCACG GGTCTATCAA GTTCGCCATT ATCAAGCACT CTGGGAAGAT AAAGACTATG CGGGCACTAT GCTTGATGTG ATTAAAAGAG CCGATGAGGA GGGGCTTGCA AAGGAAGATT ACCACTATCC CAAGTTGGTC GAACTTTACC AACAACTCAG TGCATCGAAT TGGCAGGATG AATACAAAAG CAGTATATTT GAAGTGCTCC TAAGCGATGG CATAATTACC TATGCCATTC ATTTACTTAA TGGCAAAGTC AATCCCAGTA TGCTCGGCAA AACCTGGAAC TATGATGAAG CCCATCTGGA TTTTGATACC ACATTAAAAC AGCTTGAAGA GCATATTAAA GCACATACGG TTGCCGAGGC GATTAATGGA TTGGCGCCTA AGATTACCCC TTATCATCAG CTAAAACAGT ATCTTGCCCA TTATAAAGAC TTGGCCGCCC GCTATCCTTT TACCACTATT CCCTATACGG AAGTTATCAA ACCCGGTACT ACGTCACCAT CAATAAAAGG GATAGCAGCA AGGCTGAAAG AACAGGGTTA TCTTGACGCT AACGCAACGG TGCAAGATGC CACACTCGTG GCAAATGCTC CCTTACTCTA CGACAACATC CTTGAAGCCG CGATACGTCA ATTTCAAGCT GATCATAGTC TTAAGGCGGA TGGAGTGATC GGTGCAGGCA CTATGGCCGC ATTGAATGTT CCCTATGCAC AACGCGTTGA ACAGATCCGT ATCAACCTTG AGCGCGCCCG CTGGTTATCA GCCAACTTAT CCGCAAACTA CCTAATCGTC AATTTGGCAG GCTATGAACT ATTACTTTTT AAAGACAATA ACTTAAGCTG GAGAACCGAC ATTATCATCG GTAAAATTGA CTCAAAAACG CCGCTGTTTA AATCAAAATT AAAATATGTA GTCGTGAATC CTACTTGGAC GGTACCAAAT AGCATCTCCA CCGAAATCAT TAATCATCAG CGCAAAGATC CCGATTATCT GCACAAAAAG CACTTTAAAG TGGTTGAAAG CTCAGGCACG CCCGTCGATG CCAGCGGTAT AGATTGGCAC AGTATGACAC GCAAAAACTT CCCCTACTGG TTTGTGCAAG AGCCAGGAGC AGATAACTCA CTTGGTTTAG TAAAATTTAT CTTCCCAAAC CAATATTCGA TTTATCTGCA TGATACTCCG TCTAAAAATC TATTTGATAA AACAGACAGA GCCTTTAGCC ACGGCTGTAT TCGGGTGAAA GATCCTTTAG TGCTCGCCGA TAAACTCCTG AGTGCTAATG CTAATTGGTC GAGCGAAACA CTCAATAACA AACTTGCAGA GGGAAAAACA GAAAACCTGT TTTTAGATGA ACCCTTAGAT ATTTTGATCA TGTATTGGAC GGCAACGATC AAAAATGGAA AAATCAAGTT TTACAATGAT GTATATACAC GCGACCCCGT ACTTATCGAG GCATTAAACC GCCCAACCTA TGAAGGTGTG TTAGCAGACG ACGGCTTGCT TAATACGCTG GACTAA
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Protein sequence | MVFSRKEILI MRRIHHFTLG LLLLLSPVST ACWASTPQLE ALLEPLSLGE RAKVDNTQII SAKLLSRVYQ VRHYQALWED KDYAGTMLDV IKRADEEGLA KEDYHYPKLV ELYQQLSASN WQDEYKSSIF EVLLSDGIIT YAIHLLNGKV NPSMLGKTWN YDEAHLDFDT TLKQLEEHIK AHTVAEAING LAPKITPYHQ LKQYLAHYKD LAARYPFTTI PYTEVIKPGT TSPSIKGIAA RLKEQGYLDA NATVQDATLV ANAPLLYDNI LEAAIRQFQA DHSLKADGVI GAGTMAALNV PYAQRVEQIR INLERARWLS ANLSANYLIV NLAGYELLLF KDNNLSWRTD IIIGKIDSKT PLFKSKLKYV VVNPTWTVPN SISTEIINHQ RKDPDYLHKK HFKVVESSGT PVDASGIDWH SMTRKNFPYW FVQEPGADNS LGLVKFIFPN QYSIYLHDTP SKNLFDKTDR AFSHGCIRVK DPLVLADKLL SANANWSSET LNNKLAEGKT ENLFLDEPLD ILIMYWTATI KNGKIKFYND VYTRDPVLIE ALNRPTYEGV LADDGLLNTL D
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