Gene SO_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1898 
Symbol 
ID1169663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1996463 
End bp1996867 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content50% 
IMG OID637343787 
Producttranscriptional regulator, putative 
Protein accessionNP_717506 
Protein GI24373463 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA CTAACACGCC ACAAACGACT TATTCGATCA GTGATCTCTC CAAAGAGTTT 
GATATCACGA CCCGAAGCAT TCGTTTTTAC GAAGACCAAG GTTTACTTAA GCCCAAACGT
CGCGGCCAAA CCCGCATTTA CAGTCTAAAA GACAGGGTGC GACTCAAGTT AATCCTGCGC
GGCAAGCGCC TTGGGTTCTC CCTTGCGGAA ACCCGACGTC TGTTCGAGCT TTACGATGCC
GACAAGAGCA GCACCACTCA GCTCAATACC ATGCTTGCCC TGGTGGAAGA AAAGAAATCC
GCGCTACAGC AGCAAATGGA CGATATTAAA GTGGTCCTGA TGGAGCTAAA TTCAGCCGAG
CAGCAATGCC GCCTCGCCCT AGAAGAAAGC AAAGTCAAAG CATAA
 
Protein sequence
MSATNTPQTT YSISDLSKEF DITTRSIRFY EDQGLLKPKR RGQTRIYSLK DRVRLKLILR 
GKRLGFSLAE TRRLFELYDA DKSSTTQLNT MLALVEEKKS ALQQQMDDIK VVLMELNSAE
QQCRLALEES KVKA