| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1892 |
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| Symbol | atoD |
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| ID | 1169657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1988693 |
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| End bp | 1989397 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343781 |
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| Product | acetate CoA-transferase, subunit A |
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| Protein accession | NP_717500 |
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| Protein GI | 24373457 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGAC TCAATAAAGT CGTCAGCAGC TATGAAGAAG CGTTAACAGG TTTATCCGAT
GATATGACCA TTATGGTTGG CGGTTTTGGC TTGTGCGGTA TTCCTGAAGG CTTAATCAAT
CAAATGGTTA AGATGGGCGT TAAGGGCTTA ACCGCCATTT CAAACAACGC TGGTGTGGAT
GATTTCGGTC TGGGCTTATT GTTAAAACAC CGCCAGATTT CGACCATGAT CGCCTCCTAC
GTAGGTGAGA ACGCCACCTT CGAACAGCAA ATGCTCTCGG GCGAACTCAA TGTGATTTTA
ACGCCGCAGG GCACGCTGGC GGAAAAAATC CGCGCGGGCG GTGCAGGTAT TCCAGCATTT
TTTACCGCCA CAGGCTACGG CACACCCGTT GCAGAAGGCA AAGAAACCCG CGAAATTAAA
GGCCGTCACT ATGTGTTAGA AGAATCACTG ACCGCCGATT TTGCCCTCGT TCGCGCCTGG
AAGGCCGATA CTATGGGTAA CTTAGTGTTT CGCAAAACCG CCGCCAACTT TAACCCTATG
ATGGCGACTG CGGGCAAAAT CACGGTAGTG GAAGCCGAGT TTATTGTGGA GCCGGGCGAG
CTCGATCCTG ATCATATCCA TACTCCCGGG ATTTATGTTG ATCGCGTCAT CCAAGGCAAG
TTCGAGAAAC GTATCGAGCA ACGCACGGTA AAAGCAGCGA AATAA
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| Protein sequence | MAGLNKVVSS YEEALTGLSD DMTIMVGGFG LCGIPEGLIN QMVKMGVKGL TAISNNAGVD
DFGLGLLLKH RQISTMIASY VGENATFEQQ MLSGELNVIL TPQGTLAEKI RAGGAGIPAF
FTATGYGTPV AEGKETREIK GRHYVLEESL TADFALVRAW KADTMGNLVF RKTAANFNPM
MATAGKITVV EAEFIVEPGE LDPDHIHTPG IYVDRVIQGK FEKRIEQRTV KAAK
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