Gene SO_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1884 
Symbol 
ID1169650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1982026 
End bp1982781 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content50% 
IMG OID637343774 
Producthypothetical protein 
Protein accessionNP_717492 
Protein GI24373449 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTGGT TACTGATCGC CCTCGCTGGC TTACTCGGCG GCATGTTAAA TGCGGTGGCG 
GGCGGCGGCA GTTTTATCAC CTTATTTGCC CTTGTGTTTG TGGGCGTGCC ACCATTGATG
GCCAATGCTA CGGGTACAGC GGCCCTGCTC CCCGGTTACC TTGCCAGTGC CTGGCGTTTT
CGAAAAGAGA TTGAATATCC AGCAAATCTT AGCTTGAAAA CCCTGTGCTT GATTGCGATA
GCTGGCGGAT TTCTAGGCGC GGCGATTTTG CTGAGCACCA GCGAGCAAGT ATTTGCTTAT
CTTGTTCCTT GGTTAATTTT GCTGGCAACC CTCGCCTTTA TCGCCGGACC TTGGTTACTG
AAAAAACGCT TAGCCCATGC CAACGTCACC TGTGTGAATA CCGTCAAGCC ACTGACAGCA
ATGATGATTC TCTTCATCGT TTGTATTTAC GGCGGCTATT TTAATGGTGG GTTAGGGATT
ATTTTGCTCG CGACCTTTGG GCTACTGGGG CAAACTCAAT TACAGGGTAT GAACGGGCTT
AAAAATTTAC TCTCCGCCCT ACTCACCAGC ATCGCAGTGG TAATTTACGC CCTAGGCGAT
CTGATTGATG GACAATATCT GCTACTGCTT GCCATCATGG CCATTGTTGG CGGCTATCTG
GGCGCCGCGC TGGCTTATCG TATTCCCCAA TCCCTATTAC GGGGCTTTAT TGTACTTGTG
GGTTTCGCCA TGAGCATAGG ATTTTTTATG CGTTAA
 
Protein sequence
MDWLLIALAG LLGGMLNAVA GGGSFITLFA LVFVGVPPLM ANATGTAALL PGYLASAWRF 
RKEIEYPANL SLKTLCLIAI AGGFLGAAIL LSTSEQVFAY LVPWLILLAT LAFIAGPWLL
KKRLAHANVT CVNTVKPLTA MMILFIVCIY GGYFNGGLGI ILLATFGLLG QTQLQGMNGL
KNLLSALLTS IAVVIYALGD LIDGQYLLLL AIMAIVGGYL GAALAYRIPQ SLLRGFIVLV
GFAMSIGFFM R